Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P06344 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P06344 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
P06344 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
P06344 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P06344 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.31□□□□□ -0.28
P06344 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
P06344 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P06344 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P06344 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
P06344 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P06344 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P06344 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P06344 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P06344 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
P06344 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
P06344 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.31□□□□□ -0.28
P06344 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.31□□□□□ -0.28
P06344 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P06344 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
P06344 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.31□□□□□ -0.28
P06344 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.31□□□□□ -0.28
P06344 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.31□□□□□ -0.28
P06344 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.31□□□□□ -0.28
P06344 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
P06344 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
P06344 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.31□□□□□ -0.28
P06344 Gm10154-201ENSMUST00000084445 354 ntBASIC13.31□□□□□ -0.28
P06344 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.31□□□□□ -0.28
P06344 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
P06344 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
P06344 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
P06344 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
P06344 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
P06344 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
P06344 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
P06344 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P06344 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
P06344 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
P06344 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P06344 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P06344 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
P06344 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.3□□□□□ -0.28
P06344 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
P06344 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
P06344 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06344 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06344 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06344 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06344 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06344 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06344 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06344 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
P06344 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.3□□□□□ -0.28
P06344 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.3□□□□□ -0.28
P06344 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06344 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06344 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06344 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06344 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06344 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06344 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.3□□□□□ -0.28
P06344 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06344 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.3□□□□□ -0.28
P06344 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.3□□□□□ -0.28
P06344 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.3□□□□□ -0.28
P06344 Gm45612-201ENSMUST00000211320 160 ntBASIC13.3□□□□□ -0.28
P06344 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.3□□□□□ -0.28
P06344 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06344 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06344 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06344 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06344 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
P06344 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
P06344 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
P06344 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06344 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06344 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06344 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06344 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
P06344 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06344 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
P06344 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06344 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06344 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
P06344 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06344 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06344 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
P06344 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06344 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06344 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06344 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06344 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06344 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.29□□□□□ -0.28
P06344 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06344 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06344 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06344 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06344 Gm9385-201ENSMUST00000117563 472 ntBASIC13.29□□□□□ -0.28
P06344 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms