Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Matn4O89029 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.12□□□□□ -0.15
Matn4O89029 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Matn4O89029 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Matn4O89029 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Matn4O89029 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Matn4O89029 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Matn4O89029 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Matn4O89029 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Matn4O89029 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Matn4O89029 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.12□□□□□ -0.15
Matn4O89029 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.12□□□□□ -0.15
Matn4O89029 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Matn4O89029 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.12□□□□□ -0.15
Matn4O89029 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.12□□□□□ -0.15
Matn4O89029 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.12□□□□□ -0.15
Matn4O89029 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Matn4O89029 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Matn4O89029 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.12□□□□□ -0.15
Matn4O89029 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Matn4O89029 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Matn4O89029 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Matn4O89029 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Matn4O89029 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.12□□□□□ -0.15
Matn4O89029 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Matn4O89029 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Matn4O89029 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Matn4O89029 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Matn4O89029 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Matn4O89029 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Matn4O89029 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Matn4O89029 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Matn4O89029 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Matn4O89029 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Matn4O89029 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Matn4O89029 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Matn4O89029 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Matn4O89029 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Matn4O89029 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Matn4O89029 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Matn4O89029 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Matn4O89029 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Matn4O89029 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Matn4O89029 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
Matn4O89029 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Matn4O89029 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.11□□□□□ -0.15
Matn4O89029 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Matn4O89029 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Matn4O89029 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Matn4O89029 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Matn4O89029 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Matn4O89029 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Matn4O89029 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Matn4O89029 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Matn4O89029 Gm18489-201ENSMUST00000172565 551 ntBASIC14.11□□□□□ -0.15
Matn4O89029 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Matn4O89029 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Matn4O89029 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Matn4O89029 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Matn4O89029 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Matn4O89029 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Matn4O89029 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Matn4O89029 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Matn4O89029 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Matn4O89029 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Matn4O89029 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Matn4O89029 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Matn4O89029 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Matn4O89029 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Matn4O89029 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Matn4O89029 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Matn4O89029 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Matn4O89029 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Matn4O89029 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Matn4O89029 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Matn4O89029 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Matn4O89029 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Matn4O89029 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Matn4O89029 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Matn4O89029 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Matn4O89029 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Matn4O89029 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Matn4O89029 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.1□□□□□ -0.15
Matn4O89029 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Matn4O89029 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Matn4O89029 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Matn4O89029 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.1□□□□□ -0.15
Matn4O89029 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Matn4O89029 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Matn4O89029 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Matn4O89029 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Matn4O89029 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Matn4O89029 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Matn4O89029 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Matn4O89029 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Matn4O89029 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Matn4O89029 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.1□□□□□ -0.15
Matn4O89029 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Matn4O89029 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Matn4O89029 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms