Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Syn1O88935 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Syn1O88935 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.34■□□□□ 0.05
Syn1O88935 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.34■□□□□ 0.05
Syn1O88935 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Syn1O88935 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Syn1O88935 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Syn1O88935 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Syn1O88935 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Syn1O88935 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Syn1O88935 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Syn1O88935 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Syn1O88935 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Syn1O88935 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Syn1O88935 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Syn1O88935 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Syn1O88935 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.33■□□□□ 0.04
Syn1O88935 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.33■□□□□ 0.04
Syn1O88935 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.33■□□□□ 0.04
Syn1O88935 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC15.33■□□□□ 0.04
Syn1O88935 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
Syn1O88935 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC15.33■□□□□ 0.04
Syn1O88935 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Syn1O88935 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC15.33■□□□□ 0.04
Syn1O88935 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC15.33■□□□□ 0.04
Syn1O88935 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Syn1O88935 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Syn1O88935 Gm46209-201ENSMUST00000217912 553 ntBASIC15.33■□□□□ 0.04
Syn1O88935 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Syn1O88935 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Syn1O88935 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Syn1O88935 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Syn1O88935 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Syn1O88935 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Syn1O88935 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.33■□□□□ 0.04
Syn1O88935 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Syn1O88935 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Syn1O88935 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Syn1O88935 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Syn1O88935 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Syn1O88935 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Syn1O88935 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Syn1O88935 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Syn1O88935 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syn1O88935 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syn1O88935 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syn1O88935 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syn1O88935 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syn1O88935 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Syn1O88935 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.32■□□□□ 0.04
Syn1O88935 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Syn1O88935 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syn1O88935 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Syn1O88935 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Syn1O88935 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC15.32■□□□□ 0.04
Syn1O88935 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syn1O88935 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC15.32■□□□□ 0.04
Syn1O88935 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
Syn1O88935 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC15.32■□□□□ 0.04
Syn1O88935 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.32■□□□□ 0.04
Syn1O88935 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syn1O88935 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syn1O88935 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Syn1O88935 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syn1O88935 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Syn1O88935 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.32■□□□□ 0.04
Syn1O88935 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Syn1O88935 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syn1O88935 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Syn1O88935 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syn1O88935 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Syn1O88935 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Syn1O88935 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syn1O88935 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.31■□□□□ 0.04
Syn1O88935 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.31■□□□□ 0.04
Syn1O88935 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syn1O88935 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.31■□□□□ 0.04
Syn1O88935 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Syn1O88935 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Syn1O88935 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syn1O88935 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syn1O88935 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syn1O88935 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Syn1O88935 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syn1O88935 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syn1O88935 Gm12960-201ENSMUST00000120017 1066 ntBASIC15.31■□□□□ 0.04
Syn1O88935 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.31■□□□□ 0.04
Syn1O88935 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC15.31■□□□□ 0.04
Syn1O88935 Gm9522-201ENSMUST00000182394 926 ntBASIC15.31■□□□□ 0.04
Syn1O88935 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.31■□□□□ 0.04
Syn1O88935 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.31■□□□□ 0.04
Syn1O88935 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syn1O88935 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syn1O88935 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syn1O88935 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syn1O88935 AC131068.2-201ENSMUST00000226175 1453 ntBASIC15.31■□□□□ 0.04
Syn1O88935 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syn1O88935 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
Syn1O88935 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Syn1O88935 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms