Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdac3O88895 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdac3O88895 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdac3O88895 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdac3O88895 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hdac3O88895 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.41□□□□□ -0.26
Hdac3O88895 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdac3O88895 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdac3O88895 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Hdac3O88895 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdac3O88895 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hdac3O88895 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.4□□□□□ -0.26
Hdac3O88895 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hdac3O88895 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hdac3O88895 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hdac3O88895 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hdac3O88895 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Hdac3O88895 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Hdac3O88895 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hdac3O88895 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Hdac3O88895 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.4□□□□□ -0.26
Hdac3O88895 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.4□□□□□ -0.26
Hdac3O88895 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hdac3O88895 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Hdac3O88895 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.4□□□□□ -0.26
Hdac3O88895 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13.4□□□□□ -0.26
Hdac3O88895 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.4□□□□□ -0.26
Hdac3O88895 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Hdac3O88895 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hdac3O88895 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hdac3O88895 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hdac3O88895 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hdac3O88895 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hdac3O88895 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hdac3O88895 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hdac3O88895 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hdac3O88895 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
Hdac3O88895 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hdac3O88895 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hdac3O88895 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.4□□□□□ -0.27
Hdac3O88895 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Hdac3O88895 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hdac3O88895 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hdac3O88895 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Hdac3O88895 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hdac3O88895 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hdac3O88895 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hdac3O88895 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.39□□□□□ -0.27
Hdac3O88895 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.39□□□□□ -0.27
Hdac3O88895 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hdac3O88895 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hdac3O88895 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Hdac3O88895 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Hdac3O88895 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.39□□□□□ -0.27
Hdac3O88895 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hdac3O88895 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.39□□□□□ -0.27
Hdac3O88895 Gm6376-201ENSMUST00000209407 580 ntBASIC13.39□□□□□ -0.27
Hdac3O88895 Gm6296-201ENSMUST00000222599 943 ntBASIC13.39□□□□□ -0.27
Hdac3O88895 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hdac3O88895 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hdac3O88895 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hdac3O88895 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Hdac3O88895 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hdac3O88895 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hdac3O88895 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hdac3O88895 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hdac3O88895 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
Hdac3O88895 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Hdac3O88895 Efs-202ENSMUST00000227037 2540 ntBASIC13.39□□□□□ -0.27
Hdac3O88895 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hdac3O88895 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Hdac3O88895 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hdac3O88895 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hdac3O88895 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hdac3O88895 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hdac3O88895 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Hdac3O88895 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hdac3O88895 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hdac3O88895 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.38□□□□□ -0.27
Hdac3O88895 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hdac3O88895 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hdac3O88895 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hdac3O88895 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.38□□□□□ -0.27
Hdac3O88895 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.38□□□□□ -0.27
Hdac3O88895 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hdac3O88895 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Hdac3O88895 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.38□□□□□ -0.27
Hdac3O88895 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hdac3O88895 Gm6089-201ENSMUST00000197666 938 ntBASIC13.38□□□□□ -0.27
Hdac3O88895 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hdac3O88895 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hdac3O88895 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.38□□□□□ -0.27
Hdac3O88895 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hdac3O88895 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hdac3O88895 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hdac3O88895 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hdac3O88895 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hdac3O88895 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hdac3O88895 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hdac3O88895 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms