Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Slc4a4O88343 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc4a4O88343 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Slc4a4O88343 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.62■□□□□ 0.41
Slc4a4O88343 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.62■□□□□ 0.41
Slc4a4O88343 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.62■□□□□ 0.41
Slc4a4O88343 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc4a4O88343 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc4a4O88343 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc4a4O88343 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Slc4a4O88343 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc4a4O88343 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.62■□□□□ 0.41
Slc4a4O88343 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.62■□□□□ 0.41
Slc4a4O88343 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc4a4O88343 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Slc4a4O88343 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc4a4O88343 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc4a4O88343 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc4a4O88343 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc4a4O88343 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.61■□□□□ 0.41
Slc4a4O88343 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc4a4O88343 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Slc4a4O88343 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Slc4a4O88343 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc4a4O88343 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Slc4a4O88343 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Slc4a4O88343 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Slc4a4O88343 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.61■□□□□ 0.41
Slc4a4O88343 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.61■□□□□ 0.41
Slc4a4O88343 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc4a4O88343 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc4a4O88343 Gm8396-201ENSMUST00000057361 823 ntBASIC17.61■□□□□ 0.41
Slc4a4O88343 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc4a4O88343 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc4a4O88343 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc4a4O88343 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc4a4O88343 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc4a4O88343 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Slc4a4O88343 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Slc4a4O88343 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc4a4O88343 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc4a4O88343 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc4a4O88343 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Slc4a4O88343 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc4a4O88343 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Slc4a4O88343 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc4a4O88343 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc4a4O88343 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc4a4O88343 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc4a4O88343 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Slc4a4O88343 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc4a4O88343 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.6■□□□□ 0.41
Slc4a4O88343 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.6■□□□□ 0.41
Slc4a4O88343 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.6■□□□□ 0.41
Slc4a4O88343 Gm43474-201ENSMUST00000196415 774 ntBASIC17.6■□□□□ 0.41
Slc4a4O88343 Gm43125-201ENSMUST00000201724 730 ntBASIC17.6■□□□□ 0.41
Slc4a4O88343 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.6■□□□□ 0.41
Slc4a4O88343 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Slc4a4O88343 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.6■□□□□ 0.41
Slc4a4O88343 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc4a4O88343 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC17.6■□□□□ 0.41
Slc4a4O88343 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc4a4O88343 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc4a4O88343 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc4a4O88343 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Slc4a4O88343 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc4a4O88343 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Slc4a4O88343 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Slc4a4O88343 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc4a4O88343 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc4a4O88343 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc4a4O88343 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc4a4O88343 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc4a4O88343 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Slc4a4O88343 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc4a4O88343 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
Slc4a4O88343 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc4a4O88343 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Slc4a4O88343 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
Slc4a4O88343 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Slc4a4O88343 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Slc4a4O88343 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.59■□□□□ 0.41
Slc4a4O88343 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc4a4O88343 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.59■□□□□ 0.41
Slc4a4O88343 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.59■□□□□ 0.41
Slc4a4O88343 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Slc4a4O88343 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.59■□□□□ 0.41
Slc4a4O88343 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Slc4a4O88343 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.59■□□□□ 0.41
Slc4a4O88343 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.59■□□□□ 0.41
Slc4a4O88343 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc4a4O88343 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc4a4O88343 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Slc4a4O88343 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Slc4a4O88343 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc4a4O88343 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc4a4O88343 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.58■□□□□ 0.41
Slc4a4O88343 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slc4a4O88343 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Slc4a4O88343 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms