Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.12■□□□□ 0.65
Ubr1O70481 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ubr1O70481 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ubr1O70481 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC19.12■□□□□ 0.65
Ubr1O70481 AC132467.2-202ENSMUST00000227726 559 ntBASIC19.12■□□□□ 0.65
Ubr1O70481 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ubr1O70481 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ubr1O70481 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC19.12■□□□□ 0.65
Ubr1O70481 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ubr1O70481 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ubr1O70481 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Ubr1O70481 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ubr1O70481 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ubr1O70481 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ubr1O70481 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Ubr1O70481 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ubr1O70481 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC19.12■□□□□ 0.65
Ubr1O70481 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ubr1O70481 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ubr1O70481 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ubr1O70481 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ubr1O70481 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ubr1O70481 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC19.11■□□□□ 0.65
Ubr1O70481 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ubr1O70481 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC19.11■□□□□ 0.65
Ubr1O70481 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Ubr1O70481 Gm45384-201ENSMUST00000210451 277 ntBASIC19.11■□□□□ 0.65
Ubr1O70481 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC19.11■□□□□ 0.65
Ubr1O70481 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Ubr1O70481 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ubr1O70481 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ubr1O70481 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ubr1O70481 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ubr1O70481 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Ubr1O70481 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ubr1O70481 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Ubr1O70481 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ubr1O70481 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ubr1O70481 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ubr1O70481 Gm42901-201ENSMUST00000197735 3171 ntBASIC19.11■□□□□ 0.65
Ubr1O70481 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ubr1O70481 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC19.11■□□□□ 0.65
Ubr1O70481 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Ubr1O70481 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ubr1O70481 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ubr1O70481 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.11■□□□□ 0.65
Ubr1O70481 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ubr1O70481 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Ubr1O70481 Gm12091-201ENSMUST00000146791 830 ntBASIC19.11■□□□□ 0.65
Ubr1O70481 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ubr1O70481 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC19.11■□□□□ 0.65
Ubr1O70481 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ubr1O70481 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ubr1O70481 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ubr1O70481 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ubr1O70481 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ubr1O70481 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ubr1O70481 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ubr1O70481 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ubr1O70481 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ubr1O70481 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ubr1O70481 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.1■□□□□ 0.65
Ubr1O70481 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ubr1O70481 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ubr1O70481 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC19.1■□□□□ 0.65
Ubr1O70481 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ubr1O70481 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ubr1O70481 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ubr1O70481 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ubr1O70481 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ubr1O70481 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC19.1■□□□□ 0.65
Ubr1O70481 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC19.1■□□□□ 0.65
Ubr1O70481 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ubr1O70481 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC19.1■□□□□ 0.65
Ubr1O70481 Gm15823-201ENSMUST00000064305 670 ntBASIC19.1■□□□□ 0.65
Ubr1O70481 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ubr1O70481 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ubr1O70481 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ubr1O70481 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Ubr1O70481 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
Ubr1O70481 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ubr1O70481 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ubr1O70481 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Ubr1O70481 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ubr1O70481 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Ubr1O70481 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Ubr1O70481 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC19.09■□□□□ 0.65
Ubr1O70481 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Ubr1O70481 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ubr1O70481 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ubr1O70481 AC121804.3-201ENSMUST00000223420 295 ntBASIC19.09■□□□□ 0.65
Ubr1O70481 Cdk7-205ENSMUST00000225990 1159 ntBASIC19.09■□□□□ 0.65
Ubr1O70481 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ubr1O70481 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ubr1O70481 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ubr1O70481 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Ubr1O70481 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ubr1O70481 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ubr1O70481 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ubr1O70481 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms