Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim1O70400 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim1O70400 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Pdlim1O70400 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim1O70400 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Pdlim1O70400 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim1O70400 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim1O70400 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.74□□□□□ -0.05
Pdlim1O70400 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim1O70400 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim1O70400 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim1O70400 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim1O70400 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim1O70400 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim1O70400 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.74□□□□□ -0.05
Pdlim1O70400 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim1O70400 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Pdlim1O70400 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim1O70400 Gm9385-201ENSMUST00000117563 472 ntBASIC14.74□□□□□ -0.05
Pdlim1O70400 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim1O70400 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.74□□□□□ -0.05
Pdlim1O70400 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim1O70400 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim1O70400 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim1O70400 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim1O70400 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim1O70400 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim1O70400 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim1O70400 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim1O70400 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim1O70400 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim1O70400 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim1O70400 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim1O70400 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim1O70400 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Pdlim1O70400 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim1O70400 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim1O70400 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim1O70400 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim1O70400 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim1O70400 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim1O70400 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.73□□□□□ -0.05
Pdlim1O70400 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim1O70400 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim1O70400 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.73□□□□□ -0.05
Pdlim1O70400 Rpph1-201ENSMUST00000175096 319 ntBASIC14.73□□□□□ -0.05
Pdlim1O70400 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.73□□□□□ -0.05
Pdlim1O70400 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim1O70400 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim1O70400 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.73□□□□□ -0.05
Pdlim1O70400 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim1O70400 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim1O70400 Sybu-209ENSMUST00000228639 4113 ntBASIC14.73□□□□□ -0.05
Pdlim1O70400 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim1O70400 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim1O70400 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim1O70400 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim1O70400 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim1O70400 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Pdlim1O70400 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
Pdlim1O70400 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim1O70400 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim1O70400 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim1O70400 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim1O70400 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Pdlim1O70400 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Pdlim1O70400 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim1O70400 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim1O70400 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim1O70400 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim1O70400 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim1O70400 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Pdlim1O70400 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim1O70400 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Pdlim1O70400 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim1O70400 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.72□□□□□ -0.05
Pdlim1O70400 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.72□□□□□ -0.05
Pdlim1O70400 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.72□□□□□ -0.05
Pdlim1O70400 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.72□□□□□ -0.05
Pdlim1O70400 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.72□□□□□ -0.05
Pdlim1O70400 Gm45612-201ENSMUST00000211320 160 ntBASIC14.72□□□□□ -0.05
Pdlim1O70400 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.72□□□□□ -0.05
Pdlim1O70400 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Pdlim1O70400 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Pdlim1O70400 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim1O70400 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim1O70400 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim1O70400 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim1O70400 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim1O70400 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim1O70400 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.72□□□□□ -0.05
Pdlim1O70400 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim1O70400 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.72□□□□□ -0.05
Pdlim1O70400 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Pdlim1O70400 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.72□□□□□ -0.05
Pdlim1O70400 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim1O70400 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.72□□□□□ -0.05
Pdlim1O70400 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdlim1O70400 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdlim1O70400 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms