Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trdmt1O55055 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trdmt1O55055 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
Trdmt1O55055 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trdmt1O55055 Gm16476-201ENSMUST00000221544 139 ntBASIC16.39■□□□□ 0.21
Trdmt1O55055 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trdmt1O55055 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC16.39■□□□□ 0.21
Trdmt1O55055 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trdmt1O55055 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trdmt1O55055 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trdmt1O55055 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trdmt1O55055 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trdmt1O55055 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Trdmt1O55055 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.39■□□□□ 0.21
Trdmt1O55055 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trdmt1O55055 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trdmt1O55055 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trdmt1O55055 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trdmt1O55055 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trdmt1O55055 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trdmt1O55055 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trdmt1O55055 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.38■□□□□ 0.21
Trdmt1O55055 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trdmt1O55055 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trdmt1O55055 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Trdmt1O55055 Gm15653-201ENSMUST00000119247 907 ntBASIC16.38■□□□□ 0.21
Trdmt1O55055 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.38■□□□□ 0.21
Trdmt1O55055 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.38■□□□□ 0.21
Trdmt1O55055 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.38■□□□□ 0.21
Trdmt1O55055 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.38■□□□□ 0.21
Trdmt1O55055 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trdmt1O55055 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.38■□□□□ 0.21
Trdmt1O55055 Gm2451-201ENSMUST00000199447 999 ntBASIC16.38■□□□□ 0.21
Trdmt1O55055 Gm10290-201ENSMUST00000200451 999 ntBASIC16.38■□□□□ 0.21
Trdmt1O55055 Gm46209-201ENSMUST00000217912 553 ntBASIC16.38■□□□□ 0.21
Trdmt1O55055 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trdmt1O55055 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trdmt1O55055 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trdmt1O55055 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trdmt1O55055 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.38■□□□□ 0.21
Trdmt1O55055 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trdmt1O55055 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trdmt1O55055 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trdmt1O55055 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trdmt1O55055 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.38■□□□□ 0.21
Trdmt1O55055 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trdmt1O55055 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trdmt1O55055 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trdmt1O55055 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trdmt1O55055 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trdmt1O55055 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trdmt1O55055 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trdmt1O55055 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trdmt1O55055 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Trdmt1O55055 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trdmt1O55055 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trdmt1O55055 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.37■□□□□ 0.21
Trdmt1O55055 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trdmt1O55055 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trdmt1O55055 Gm6222-201ENSMUST00000120787 396 ntBASIC16.37■□□□□ 0.21
Trdmt1O55055 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.37■□□□□ 0.21
Trdmt1O55055 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC16.37■□□□□ 0.21
Trdmt1O55055 Gm43703-201ENSMUST00000200523 763 ntBASIC16.37■□□□□ 0.21
Trdmt1O55055 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trdmt1O55055 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC16.37■□□□□ 0.21
Trdmt1O55055 Gm6218-201ENSMUST00000219812 628 ntBASIC16.37■□□□□ 0.21
Trdmt1O55055 Dupd1-202ENSMUST00000224735 548 ntBASIC16.37■□□□□ 0.21
Trdmt1O55055 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trdmt1O55055 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trdmt1O55055 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trdmt1O55055 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trdmt1O55055 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trdmt1O55055 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trdmt1O55055 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trdmt1O55055 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trdmt1O55055 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trdmt1O55055 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.37■□□□□ 0.21
Trdmt1O55055 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trdmt1O55055 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trdmt1O55055 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trdmt1O55055 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trdmt1O55055 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trdmt1O55055 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Trdmt1O55055 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trdmt1O55055 Asic1-205ENSMUST00000228185 1818 ntBASIC16.36■□□□□ 0.21
Trdmt1O55055 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.36■□□□□ 0.21
Trdmt1O55055 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trdmt1O55055 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trdmt1O55055 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trdmt1O55055 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.36■□□□□ 0.21
Trdmt1O55055 Gm4875-201ENSMUST00000118257 786 ntBASIC16.36■□□□□ 0.21
Trdmt1O55055 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC16.36■□□□□ 0.21
Trdmt1O55055 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trdmt1O55055 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trdmt1O55055 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trdmt1O55055 Gm27631-201ENSMUST00000184163 466 ntBASIC16.36■□□□□ 0.21
Trdmt1O55055 Gm7653-201ENSMUST00000214567 508 ntBASIC16.36■□□□□ 0.21
Trdmt1O55055 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trdmt1O55055 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trdmt1O55055 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms