Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarce1O54941 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarce1O54941 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smarce1O54941 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarce1O54941 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smarce1O54941 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarce1O54941 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarce1O54941 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarce1O54941 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.78■□□□□ 0.44
Smarce1O54941 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarce1O54941 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarce1O54941 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarce1O54941 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarce1O54941 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.44
Smarce1O54941 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarce1O54941 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarce1O54941 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarce1O54941 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarce1O54941 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.77■□□□□ 0.44
Smarce1O54941 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.77■□□□□ 0.44
Smarce1O54941 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.77■□□□□ 0.44
Smarce1O54941 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Smarce1O54941 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.77■□□□□ 0.44
Smarce1O54941 AC151836.1-202ENSMUST00000226259 753 ntBASIC17.77■□□□□ 0.44
Smarce1O54941 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarce1O54941 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarce1O54941 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarce1O54941 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.77■□□□□ 0.44
Smarce1O54941 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Smarce1O54941 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarce1O54941 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarce1O54941 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Smarce1O54941 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Smarce1O54941 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Smarce1O54941 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Smarce1O54941 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Smarce1O54941 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Smarce1O54941 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Smarce1O54941 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Smarce1O54941 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Smarce1O54941 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Smarce1O54941 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Smarce1O54941 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Smarce1O54941 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarce1O54941 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarce1O54941 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarce1O54941 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarce1O54941 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smarce1O54941 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarce1O54941 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarce1O54941 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarce1O54941 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Smarce1O54941 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smarce1O54941 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.76■□□□□ 0.43
Smarce1O54941 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.76■□□□□ 0.43
Smarce1O54941 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.76■□□□□ 0.43
Smarce1O54941 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.76■□□□□ 0.43
Smarce1O54941 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.76■□□□□ 0.43
Smarce1O54941 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarce1O54941 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smarce1O54941 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarce1O54941 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarce1O54941 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarce1O54941 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.76■□□□□ 0.43
Smarce1O54941 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarce1O54941 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarce1O54941 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarce1O54941 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarce1O54941 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.76■□□□□ 0.43
Smarce1O54941 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smarce1O54941 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarce1O54941 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarce1O54941 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smarce1O54941 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarce1O54941 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarce1O54941 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.75■□□□□ 0.43
Smarce1O54941 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smarce1O54941 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarce1O54941 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarce1O54941 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Smarce1O54941 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarce1O54941 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smarce1O54941 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Smarce1O54941 Gm12008-201ENSMUST00000117791 755 ntBASIC17.75■□□□□ 0.43
Smarce1O54941 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.75■□□□□ 0.43
Smarce1O54941 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarce1O54941 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.75■□□□□ 0.43
Smarce1O54941 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarce1O54941 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarce1O54941 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smarce1O54941 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarce1O54941 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Smarce1O54941 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarce1O54941 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarce1O54941 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Smarce1O54941 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Smarce1O54941 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smarce1O54941 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Smarce1O54941 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Smarce1O54941 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms