Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ChkaO54804 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ChkaO54804 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ChkaO54804 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ChkaO54804 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
ChkaO54804 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.11■□□□□ 0.01
ChkaO54804 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ChkaO54804 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.11■□□□□ 0.01
ChkaO54804 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ChkaO54804 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ChkaO54804 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ChkaO54804 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ChkaO54804 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ChkaO54804 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ChkaO54804 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.11■□□□□ 0.01
ChkaO54804 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.11■□□□□ 0.01
ChkaO54804 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ChkaO54804 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ChkaO54804 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ChkaO54804 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ChkaO54804 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ChkaO54804 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ChkaO54804 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.11■□□□□ 0.01
ChkaO54804 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ChkaO54804 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.11■□□□□ 0.01
ChkaO54804 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ChkaO54804 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ChkaO54804 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ChkaO54804 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.11■□□□□ 0.01
ChkaO54804 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ChkaO54804 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ChkaO54804 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ChkaO54804 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ChkaO54804 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
ChkaO54804 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ChkaO54804 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ChkaO54804 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ChkaO54804 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ChkaO54804 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ChkaO54804 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.1■□□□□ 0.01
ChkaO54804 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
ChkaO54804 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
ChkaO54804 Gm6376-201ENSMUST00000209407 580 ntBASIC15.1■□□□□ 0.01
ChkaO54804 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ChkaO54804 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ChkaO54804 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ChkaO54804 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ChkaO54804 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ChkaO54804 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ChkaO54804 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ChkaO54804 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ChkaO54804 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ChkaO54804 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
ChkaO54804 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ChkaO54804 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ChkaO54804 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ChkaO54804 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ChkaO54804 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ChkaO54804 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
ChkaO54804 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
ChkaO54804 Gm15173-201ENSMUST00000122049 433 ntBASIC15.09■□□□□ 0.01
ChkaO54804 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.09■□□□□ 0.01
ChkaO54804 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ChkaO54804 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ChkaO54804 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ChkaO54804 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ChkaO54804 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ChkaO54804 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ChkaO54804 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ChkaO54804 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
ChkaO54804 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ChkaO54804 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
ChkaO54804 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ChkaO54804 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ChkaO54804 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.09■□□□□ 0.01
ChkaO54804 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ChkaO54804 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
ChkaO54804 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
ChkaO54804 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.09■□□□□ 0.01
ChkaO54804 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ChkaO54804 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
ChkaO54804 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
ChkaO54804 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
ChkaO54804 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
ChkaO54804 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ChkaO54804 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
ChkaO54804 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
ChkaO54804 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ChkaO54804 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.08■□□□□ 0
ChkaO54804 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
ChkaO54804 Gm7222-201ENSMUST00000117512 906 ntBASIC15.08■□□□□ 0
ChkaO54804 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.08■□□□□ 0
ChkaO54804 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.08■□□□□ 0
ChkaO54804 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.08■□□□□ 0
ChkaO54804 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.08■□□□□ 0
ChkaO54804 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
ChkaO54804 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.08■□□□□ 0
ChkaO54804 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
ChkaO54804 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.08■□□□□ 0
ChkaO54804 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms