Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ccr6O54689 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccr6O54689 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccr6O54689 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccr6O54689 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Ccr6O54689 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.55□□□□□ -0.4
Ccr6O54689 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccr6O54689 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccr6O54689 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.55□□□□□ -0.4
Ccr6O54689 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccr6O54689 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccr6O54689 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccr6O54689 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Ccr6O54689 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccr6O54689 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccr6O54689 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccr6O54689 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccr6O54689 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccr6O54689 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccr6O54689 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccr6O54689 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.54□□□□□ -0.4
Ccr6O54689 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccr6O54689 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccr6O54689 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccr6O54689 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.54□□□□□ -0.4
Ccr6O54689 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ccr6O54689 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccr6O54689 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.54□□□□□ -0.4
Ccr6O54689 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccr6O54689 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccr6O54689 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccr6O54689 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.54□□□□□ -0.4
Ccr6O54689 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccr6O54689 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccr6O54689 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccr6O54689 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccr6O54689 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.54□□□□□ -0.4
Ccr6O54689 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccr6O54689 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccr6O54689 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccr6O54689 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccr6O54689 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccr6O54689 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccr6O54689 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccr6O54689 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccr6O54689 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccr6O54689 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccr6O54689 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccr6O54689 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccr6O54689 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccr6O54689 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccr6O54689 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.53□□□□□ -0.4
Ccr6O54689 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ccr6O54689 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.53□□□□□ -0.4
Ccr6O54689 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccr6O54689 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccr6O54689 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccr6O54689 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccr6O54689 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccr6O54689 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.53□□□□□ -0.4
Ccr6O54689 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccr6O54689 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccr6O54689 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccr6O54689 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccr6O54689 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ccr6O54689 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccr6O54689 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccr6O54689 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccr6O54689 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccr6O54689 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccr6O54689 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccr6O54689 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccr6O54689 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccr6O54689 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccr6O54689 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.52□□□□□ -0.4
Ccr6O54689 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccr6O54689 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccr6O54689 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.52□□□□□ -0.4
Ccr6O54689 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccr6O54689 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccr6O54689 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccr6O54689 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccr6O54689 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccr6O54689 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccr6O54689 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccr6O54689 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccr6O54689 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccr6O54689 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccr6O54689 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccr6O54689 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccr6O54689 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccr6O54689 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.52□□□□□ -0.41
Ccr6O54689 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.52□□□□□ -0.41
Ccr6O54689 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC12.52□□□□□ -0.41
Ccr6O54689 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccr6O54689 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccr6O54689 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccr6O54689 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccr6O54689 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccr6O54689 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms