Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1i3O35627 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1i3O35627 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.06■□□□□ 0.16
Nr1i3O35627 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.06■□□□□ 0.16
Nr1i3O35627 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.06■□□□□ 0.16
Nr1i3O35627 Gm7862-201ENSMUST00000121461 292 ntBASIC16.06■□□□□ 0.16
Nr1i3O35627 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1i3O35627 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1i3O35627 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.06■□□□□ 0.16
Nr1i3O35627 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1i3O35627 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Nr1i3O35627 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1i3O35627 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1i3O35627 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1i3O35627 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1i3O35627 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.06■□□□□ 0.16
Nr1i3O35627 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1i3O35627 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1i3O35627 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1i3O35627 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1i3O35627 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1i3O35627 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1i3O35627 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Nr1i3O35627 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1i3O35627 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1i3O35627 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1i3O35627 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1i3O35627 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1i3O35627 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nr1i3O35627 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nr1i3O35627 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nr1i3O35627 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.05■□□□□ 0.16
Nr1i3O35627 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nr1i3O35627 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.05■□□□□ 0.16
Nr1i3O35627 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nr1i3O35627 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nr1i3O35627 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nr1i3O35627 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.05■□□□□ 0.16
Nr1i3O35627 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nr1i3O35627 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Nr1i3O35627 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nr1i3O35627 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nr1i3O35627 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nr1i3O35627 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Nr1i3O35627 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.05■□□□□ 0.16
Nr1i3O35627 Gm45167-201ENSMUST00000208007 322 ntBASIC16.05■□□□□ 0.16
Nr1i3O35627 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.05■□□□□ 0.16
Nr1i3O35627 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nr1i3O35627 Gm18246-201ENSMUST00000221023 728 ntBASIC16.05■□□□□ 0.16
Nr1i3O35627 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nr1i3O35627 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nr1i3O35627 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nr1i3O35627 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nr1i3O35627 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Nr1i3O35627 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Nr1i3O35627 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nr1i3O35627 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Nr1i3O35627 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Nr1i3O35627 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Nr1i3O35627 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nr1i3O35627 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nr1i3O35627 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nr1i3O35627 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nr1i3O35627 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nr1i3O35627 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nr1i3O35627 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.04■□□□□ 0.16
Nr1i3O35627 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Nr1i3O35627 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.04■□□□□ 0.16
Nr1i3O35627 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Nr1i3O35627 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nr1i3O35627 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nr1i3O35627 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nr1i3O35627 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nr1i3O35627 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nr1i3O35627 Gm24589-201ENSMUST00000116692 94 ntBASIC16.04■□□□□ 0.16
Nr1i3O35627 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.04■□□□□ 0.16
Nr1i3O35627 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.04■□□□□ 0.16
Nr1i3O35627 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Nr1i3O35627 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
Nr1i3O35627 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nr1i3O35627 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.04■□□□□ 0.16
Nr1i3O35627 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Nr1i3O35627 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nr1i3O35627 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Nr1i3O35627 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nr1i3O35627 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nr1i3O35627 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nr1i3O35627 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nr1i3O35627 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nr1i3O35627 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Nr1i3O35627 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nr1i3O35627 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Nr1i3O35627 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nr1i3O35627 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.03■□□□□ 0.16
Nr1i3O35627 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1i3O35627 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Nr1i3O35627 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1i3O35627 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1i3O35627 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1i3O35627 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms