Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Npc1O35604 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.6□□□□□ -0.07
Npc1O35604 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Npc1O35604 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Npc1O35604 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Npc1O35604 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Npc1O35604 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Npc1O35604 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Npc1O35604 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Npc1O35604 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.59□□□□□ -0.07
Npc1O35604 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Npc1O35604 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Npc1O35604 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Npc1O35604 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Npc1O35604 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Npc1O35604 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Npc1O35604 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Npc1O35604 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Npc1O35604 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Npc1O35604 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Npc1O35604 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Npc1O35604 Gm13597-201ENSMUST00000121239 375 ntBASIC14.59□□□□□ -0.07
Npc1O35604 Gm5177-201ENSMUST00000183092 997 ntBASIC14.59□□□□□ -0.07
Npc1O35604 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.59□□□□□ -0.07
Npc1O35604 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.59□□□□□ -0.07
Npc1O35604 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Npc1O35604 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Npc1O35604 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Npc1O35604 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Npc1O35604 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Npc1O35604 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Npc1O35604 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Npc1O35604 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Npc1O35604 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Npc1O35604 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Npc1O35604 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Npc1O35604 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Npc1O35604 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.58□□□□□ -0.07
Npc1O35604 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Npc1O35604 Grk6-207ENSMUST00000225925 2769 ntBASIC14.58□□□□□ -0.07
Npc1O35604 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Npc1O35604 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Npc1O35604 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Npc1O35604 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Npc1O35604 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Npc1O35604 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Npc1O35604 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Npc1O35604 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Npc1O35604 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.58□□□□□ -0.08
Npc1O35604 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Npc1O35604 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.58□□□□□ -0.08
Npc1O35604 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Npc1O35604 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Npc1O35604 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Npc1O35604 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.58□□□□□ -0.08
Npc1O35604 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Npc1O35604 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Npc1O35604 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Npc1O35604 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Npc1O35604 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Npc1O35604 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.58□□□□□ -0.08
Npc1O35604 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Npc1O35604 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Npc1O35604 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Npc1O35604 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Npc1O35604 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Npc1O35604 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.58□□□□□ -0.08
Npc1O35604 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Npc1O35604 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Npc1O35604 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.57□□□□□ -0.08
Npc1O35604 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Npc1O35604 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Npc1O35604 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Npc1O35604 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Npc1O35604 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Npc1O35604 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Npc1O35604 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Npc1O35604 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Npc1O35604 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Npc1O35604 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Npc1O35604 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Npc1O35604 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Npc1O35604 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Npc1O35604 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Npc1O35604 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Npc1O35604 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.57□□□□□ -0.08
Npc1O35604 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Npc1O35604 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Npc1O35604 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Npc1O35604 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Npc1O35604 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Npc1O35604 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Npc1O35604 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Npc1O35604 Gm25911-201ENSMUST00000157621 56 ntBASIC14.57□□□□□ -0.08
Npc1O35604 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Npc1O35604 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Npc1O35604 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Npc1O35604 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Npc1O35604 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Npc1O35604 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms