Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk4O35493 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk4O35493 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk4O35493 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.4□□□□□ -0.1
Clk4O35493 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk4O35493 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk4O35493 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk4O35493 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk4O35493 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk4O35493 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.4□□□□□ -0.1
Clk4O35493 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk4O35493 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk4O35493 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk4O35493 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.11
Clk4O35493 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Clk4O35493 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clk4O35493 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clk4O35493 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clk4O35493 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clk4O35493 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Clk4O35493 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clk4O35493 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clk4O35493 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clk4O35493 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Clk4O35493 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clk4O35493 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.39□□□□□ -0.11
Clk4O35493 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.39□□□□□ -0.11
Clk4O35493 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clk4O35493 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clk4O35493 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clk4O35493 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clk4O35493 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clk4O35493 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clk4O35493 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clk4O35493 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.39□□□□□ -0.11
Clk4O35493 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clk4O35493 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clk4O35493 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Clk4O35493 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Clk4O35493 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clk4O35493 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.39□□□□□ -0.11
Clk4O35493 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clk4O35493 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clk4O35493 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clk4O35493 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clk4O35493 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clk4O35493 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clk4O35493 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clk4O35493 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clk4O35493 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clk4O35493 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Clk4O35493 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clk4O35493 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.38□□□□□ -0.11
Clk4O35493 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clk4O35493 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.38□□□□□ -0.11
Clk4O35493 Gm14140-201ENSMUST00000119999 995 ntBASIC14.38□□□□□ -0.11
Clk4O35493 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.38□□□□□ -0.11
Clk4O35493 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.38□□□□□ -0.11
Clk4O35493 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clk4O35493 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clk4O35493 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clk4O35493 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clk4O35493 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clk4O35493 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clk4O35493 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clk4O35493 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clk4O35493 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clk4O35493 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clk4O35493 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Clk4O35493 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clk4O35493 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clk4O35493 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clk4O35493 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clk4O35493 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clk4O35493 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clk4O35493 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clk4O35493 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clk4O35493 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clk4O35493 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clk4O35493 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clk4O35493 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk4O35493 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk4O35493 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Clk4O35493 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk4O35493 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk4O35493 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk4O35493 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk4O35493 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk4O35493 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clk4O35493 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk4O35493 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk4O35493 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.37□□□□□ -0.11
Clk4O35493 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clk4O35493 Gm4899-201ENSMUST00000178708 719 ntBASIC14.37□□□□□ -0.11
Clk4O35493 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clk4O35493 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clk4O35493 Gm18206-201ENSMUST00000207027 926 ntBASIC14.37□□□□□ -0.11
Clk4O35493 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk4O35493 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Clk4O35493 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms