Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clk2O35491 Gm9824-201ENSMUST00000178707 561 ntBASIC16.21■□□□□ 0.19
Clk2O35491 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clk2O35491 Gm8116-201ENSMUST00000182917 1201 ntBASIC16.21■□□□□ 0.19
Clk2O35491 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.21■□□□□ 0.19
Clk2O35491 Gm10576-201ENSMUST00000191927 825 ntBASIC16.21■□□□□ 0.19
Clk2O35491 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.21■□□□□ 0.19
Clk2O35491 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Clk2O35491 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Clk2O35491 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clk2O35491 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clk2O35491 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clk2O35491 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clk2O35491 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Clk2O35491 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Clk2O35491 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.21■□□□□ 0.18
Clk2O35491 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clk2O35491 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Clk2O35491 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.2■□□□□ 0.18
Clk2O35491 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Clk2O35491 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Clk2O35491 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clk2O35491 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clk2O35491 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clk2O35491 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clk2O35491 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clk2O35491 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clk2O35491 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clk2O35491 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clk2O35491 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Clk2O35491 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clk2O35491 Gm29541-201ENSMUST00000191351 678 ntBASIC16.2■□□□□ 0.18
Clk2O35491 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Clk2O35491 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clk2O35491 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Clk2O35491 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
Clk2O35491 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clk2O35491 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Clk2O35491 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Clk2O35491 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clk2O35491 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clk2O35491 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clk2O35491 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Clk2O35491 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clk2O35491 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.19■□□□□ 0.18
Clk2O35491 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clk2O35491 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clk2O35491 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clk2O35491 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Clk2O35491 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clk2O35491 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Clk2O35491 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Clk2O35491 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC16.19■□□□□ 0.18
Clk2O35491 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Clk2O35491 Gm8749-201ENSMUST00000117737 331 ntBASIC16.19■□□□□ 0.18
Clk2O35491 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Clk2O35491 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Clk2O35491 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC16.19■□□□□ 0.18
Clk2O35491 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Clk2O35491 Gm27430-201ENSMUST00000184585 107 ntBASIC16.19■□□□□ 0.18
Clk2O35491 Gm44333-201ENSMUST00000197168 107 ntBASIC16.19■□□□□ 0.18
Clk2O35491 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clk2O35491 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clk2O35491 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clk2O35491 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.19■□□□□ 0.18
Clk2O35491 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Clk2O35491 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.19■□□□□ 0.18
Clk2O35491 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Clk2O35491 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clk2O35491 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.19■□□□□ 0.18
Clk2O35491 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clk2O35491 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Clk2O35491 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clk2O35491 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clk2O35491 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clk2O35491 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clk2O35491 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Clk2O35491 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clk2O35491 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Clk2O35491 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Clk2O35491 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clk2O35491 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clk2O35491 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Clk2O35491 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clk2O35491 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clk2O35491 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.18■□□□□ 0.18
Clk2O35491 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Clk2O35491 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clk2O35491 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clk2O35491 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clk2O35491 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clk2O35491 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Clk2O35491 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Clk2O35491 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.18■□□□□ 0.18
Clk2O35491 Gm18049-201ENSMUST00000208909 581 ntBASIC16.18■□□□□ 0.18
Clk2O35491 AC158529.1-201ENSMUST00000223618 239 ntBASIC16.18■□□□□ 0.18
Clk2O35491 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clk2O35491 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clk2O35491 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clk2O35491 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms