Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Efnb3O35393 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Efnb3O35393 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Efnb3O35393 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Efnb3O35393 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC11.84□□□□□ -0.51
Efnb3O35393 Gm13312-201ENSMUST00000119631 718 ntBASIC11.84□□□□□ -0.51
Efnb3O35393 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC11.84□□□□□ -0.51
Efnb3O35393 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC11.84□□□□□ -0.51
Efnb3O35393 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC11.84□□□□□ -0.51
Efnb3O35393 AC117588.1-201ENSMUST00000228510 999 ntBASIC11.84□□□□□ -0.51
Efnb3O35393 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Efnb3O35393 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Efnb3O35393 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Efnb3O35393 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.84□□□□□ -0.51
Efnb3O35393 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Efnb3O35393 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Efnb3O35393 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Efnb3O35393 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Efnb3O35393 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Efnb3O35393 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Efnb3O35393 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Efnb3O35393 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Efnb3O35393 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.84□□□□□ -0.51
Efnb3O35393 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Efnb3O35393 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Efnb3O35393 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Efnb3O35393 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Efnb3O35393 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Efnb3O35393 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Efnb3O35393 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Efnb3O35393 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Efnb3O35393 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Efnb3O35393 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Efnb3O35393 Celf4-206ENSMUST00000224553 1729 ntBASIC11.83□□□□□ -0.52
Efnb3O35393 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Efnb3O35393 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Efnb3O35393 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Efnb3O35393 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Efnb3O35393 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Efnb3O35393 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Efnb3O35393 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC11.83□□□□□ -0.52
Efnb3O35393 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC11.83□□□□□ -0.52
Efnb3O35393 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Efnb3O35393 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Efnb3O35393 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Efnb3O35393 Gm7284-201ENSMUST00000131667 944 ntBASIC11.83□□□□□ -0.52
Efnb3O35393 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC11.83□□□□□ -0.52
Efnb3O35393 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC11.83□□□□□ -0.52
Efnb3O35393 Gm21362-201ENSMUST00000194272 928 ntBASIC11.83□□□□□ -0.52
Efnb3O35393 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Efnb3O35393 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC11.83□□□□□ -0.52
Efnb3O35393 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Efnb3O35393 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Efnb3O35393 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Efnb3O35393 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Efnb3O35393 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Efnb3O35393 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Efnb3O35393 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Efnb3O35393 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Efnb3O35393 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Efnb3O35393 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Efnb3O35393 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.82□□□□□ -0.52
Efnb3O35393 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Efnb3O35393 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Efnb3O35393 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Efnb3O35393 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Efnb3O35393 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Efnb3O35393 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Efnb3O35393 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Efnb3O35393 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Efnb3O35393 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Efnb3O35393 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Efnb3O35393 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Efnb3O35393 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Efnb3O35393 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Efnb3O35393 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Efnb3O35393 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Efnb3O35393 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Efnb3O35393 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Efnb3O35393 Gm12008-201ENSMUST00000117791 755 ntBASIC11.82□□□□□ -0.52
Efnb3O35393 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC11.82□□□□□ -0.52
Efnb3O35393 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Efnb3O35393 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Efnb3O35393 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Efnb3O35393 Gm27742-201ENSMUST00000184667 60 ntBASIC11.82□□□□□ -0.52
Efnb3O35393 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC11.82□□□□□ -0.52
Efnb3O35393 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Efnb3O35393 AC154471.1-201ENSMUST00000224418 436 ntBASIC11.82□□□□□ -0.52
Efnb3O35393 AC127349.1-201ENSMUST00000224590 266 ntBASIC11.82□□□□□ -0.52
Efnb3O35393 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Efnb3O35393 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Efnb3O35393 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Efnb3O35393 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Efnb3O35393 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Efnb3O35393 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Efnb3O35393 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Efnb3O35393 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Efnb3O35393 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Efnb3O35393 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Efnb3O35393 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms