Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Alx4O35137 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Alx4O35137 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Alx4O35137 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Alx4O35137 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Alx4O35137 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.35□□□□□ -0.27
Alx4O35137 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Alx4O35137 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Alx4O35137 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Alx4O35137 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Alx4O35137 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Alx4O35137 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Alx4O35137 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Alx4O35137 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.34□□□□□ -0.27
Alx4O35137 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Alx4O35137 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Alx4O35137 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Alx4O35137 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Alx4O35137 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Alx4O35137 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Alx4O35137 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Alx4O35137 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Alx4O35137 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Alx4O35137 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Alx4O35137 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Alx4O35137 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.34□□□□□ -0.27
Alx4O35137 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Alx4O35137 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Alx4O35137 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Alx4O35137 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Alx4O35137 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.34□□□□□ -0.27
Alx4O35137 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Alx4O35137 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Alx4O35137 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Alx4O35137 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Alx4O35137 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Alx4O35137 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Alx4O35137 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.34□□□□□ -0.27
Alx4O35137 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Alx4O35137 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Alx4O35137 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Alx4O35137 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Alx4O35137 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Alx4O35137 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Alx4O35137 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Alx4O35137 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Alx4O35137 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Alx4O35137 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Alx4O35137 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Alx4O35137 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Alx4O35137 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Alx4O35137 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.34□□□□□ -0.27
Alx4O35137 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Alx4O35137 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Alx4O35137 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Alx4O35137 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Alx4O35137 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Alx4O35137 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.33□□□□□ -0.28
Alx4O35137 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Alx4O35137 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Alx4O35137 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Alx4O35137 Gm8097-201ENSMUST00000117903 829 ntBASIC13.33□□□□□ -0.28
Alx4O35137 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Alx4O35137 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Alx4O35137 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.33□□□□□ -0.28
Alx4O35137 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Alx4O35137 AC121577.1-201ENSMUST00000227302 707 ntBASIC13.33□□□□□ -0.28
Alx4O35137 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.33□□□□□ -0.28
Alx4O35137 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Alx4O35137 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Alx4O35137 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Alx4O35137 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Alx4O35137 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Alx4O35137 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Alx4O35137 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.33□□□□□ -0.28
Alx4O35137 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Alx4O35137 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Alx4O35137 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Alx4O35137 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Alx4O35137 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Alx4O35137 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Alx4O35137 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Alx4O35137 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Alx4O35137 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Alx4O35137 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Alx4O35137 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Alx4O35137 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Alx4O35137 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Alx4O35137 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Alx4O35137 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Alx4O35137 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Alx4O35137 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx4O35137 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx4O35137 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx4O35137 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx4O35137 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx4O35137 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx4O35137 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx4O35137 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.32□□□□□ -0.28
Alx4O35137 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms