Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ercc2O08811 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ercc2O08811 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ercc2O08811 Gm16198-201ENSMUST00000118766 670 ntBASIC15.29■□□□□ 0.04
Ercc2O08811 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.29■□□□□ 0.04
Ercc2O08811 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.29■□□□□ 0.04
Ercc2O08811 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ercc2O08811 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.29■□□□□ 0.04
Ercc2O08811 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.29■□□□□ 0.04
Ercc2O08811 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ercc2O08811 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ercc2O08811 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ercc2O08811 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ercc2O08811 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ercc2O08811 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ercc2O08811 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ercc2O08811 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.29■□□□□ 0.04
Ercc2O08811 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.29■□□□□ 0.04
Ercc2O08811 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ercc2O08811 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.28■□□□□ 0.04
Ercc2O08811 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ercc2O08811 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.28■□□□□ 0.04
Ercc2O08811 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ercc2O08811 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ercc2O08811 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ercc2O08811 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ercc2O08811 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ercc2O08811 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ercc2O08811 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.28■□□□□ 0.04
Ercc2O08811 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ercc2O08811 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.28■□□□□ 0.04
Ercc2O08811 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ercc2O08811 Gm11779-201ENSMUST00000118541 368 ntBASIC15.28■□□□□ 0.04
Ercc2O08811 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ercc2O08811 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.28■□□□□ 0.04
Ercc2O08811 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.28■□□□□ 0.04
Ercc2O08811 Thap2-203ENSMUST00000218989 527 ntBASIC15.28■□□□□ 0.04
Ercc2O08811 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.28■□□□□ 0.04
Ercc2O08811 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ercc2O08811 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ercc2O08811 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ercc2O08811 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ercc2O08811 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ercc2O08811 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Ercc2O08811 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ercc2O08811 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ercc2O08811 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ercc2O08811 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ercc2O08811 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.28■□□□□ 0.04
Ercc2O08811 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ercc2O08811 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ercc2O08811 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ercc2O08811 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ercc2O08811 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ercc2O08811 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.04
Ercc2O08811 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Ercc2O08811 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ercc2O08811 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ercc2O08811 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ercc2O08811 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ercc2O08811 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ercc2O08811 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ercc2O08811 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Ercc2O08811 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Ercc2O08811 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ercc2O08811 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.27■□□□□ 0.04
Ercc2O08811 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.27■□□□□ 0.04
Ercc2O08811 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ercc2O08811 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Ercc2O08811 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.27■□□□□ 0.04
Ercc2O08811 Gm45747-201ENSMUST00000212203 999 ntBASIC15.27■□□□□ 0.04
Ercc2O08811 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ercc2O08811 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ercc2O08811 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ercc2O08811 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.27■□□□□ 0.04
Ercc2O08811 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ercc2O08811 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ercc2O08811 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ercc2O08811 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ercc2O08811 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.27■□□□□ 0.03
Ercc2O08811 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ercc2O08811 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ercc2O08811 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ercc2O08811 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ercc2O08811 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.27■□□□□ 0.03
Ercc2O08811 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ercc2O08811 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Ercc2O08811 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ercc2O08811 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Ercc2O08811 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ercc2O08811 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ercc2O08811 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ercc2O08811 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ercc2O08811 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ercc2O08811 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.26■□□□□ 0.03
Ercc2O08811 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ercc2O08811 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ercc2O08811 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ercc2O08811 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ercc2O08811 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms