Protein–RNA interactions for Protein: O08540

Msmb, Beta-microseminoprotein, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MsmbO08540 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
MsmbO08540 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
MsmbO08540 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
MsmbO08540 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
MsmbO08540 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
MsmbO08540 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
MsmbO08540 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
MsmbO08540 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.57
MsmbO08540 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
MsmbO08540 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.57
MsmbO08540 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
MsmbO08540 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
MsmbO08540 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC11.51□□□□□ -0.57
MsmbO08540 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MsmbO08540 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MsmbO08540 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
MsmbO08540 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
MsmbO08540 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MsmbO08540 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MsmbO08540 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MsmbO08540 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
MsmbO08540 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
MsmbO08540 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
MsmbO08540 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
MsmbO08540 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
MsmbO08540 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC11.51□□□□□ -0.57
MsmbO08540 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
MsmbO08540 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
MsmbO08540 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
MsmbO08540 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC11.51□□□□□ -0.57
MsmbO08540 Gm4913-201ENSMUST00000117075 1290 ntBASIC11.51□□□□□ -0.57
MsmbO08540 Gm12892-201ENSMUST00000117367 1146 ntBASIC11.51□□□□□ -0.57
MsmbO08540 Gm12008-201ENSMUST00000117791 755 ntBASIC11.51□□□□□ -0.57
MsmbO08540 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
MsmbO08540 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
MsmbO08540 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC11.51□□□□□ -0.57
MsmbO08540 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC11.51□□□□□ -0.57
MsmbO08540 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
MsmbO08540 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MsmbO08540 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
MsmbO08540 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
MsmbO08540 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
MsmbO08540 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MsmbO08540 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
MsmbO08540 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
MsmbO08540 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MsmbO08540 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MsmbO08540 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MsmbO08540 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MsmbO08540 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MsmbO08540 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
MsmbO08540 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
MsmbO08540 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC11.51□□□□□ -0.57
MsmbO08540 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MsmbO08540 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
MsmbO08540 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
MsmbO08540 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
MsmbO08540 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
MsmbO08540 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC11.5□□□□□ -0.57
MsmbO08540 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MsmbO08540 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MsmbO08540 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
MsmbO08540 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
MsmbO08540 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MsmbO08540 Gm5648-201ENSMUST00000122244 1587 ntBASIC11.5□□□□□ -0.57
MsmbO08540 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MsmbO08540 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
MsmbO08540 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
MsmbO08540 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
MsmbO08540 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
MsmbO08540 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
MsmbO08540 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MsmbO08540 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MsmbO08540 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MsmbO08540 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MsmbO08540 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC11.5□□□□□ -0.57
MsmbO08540 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
MsmbO08540 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
MsmbO08540 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC11.5□□□□□ -0.57
MsmbO08540 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MsmbO08540 Gm9385-201ENSMUST00000117563 472 ntBASIC11.5□□□□□ -0.57
MsmbO08540 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC11.5□□□□□ -0.57
MsmbO08540 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MsmbO08540 Gm17271-201ENSMUST00000165535 355 ntBASIC11.5□□□□□ -0.57
MsmbO08540 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MsmbO08540 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
MsmbO08540 AC154572.2-201ENSMUST00000225105 997 ntBASIC11.5□□□□□ -0.57
MsmbO08540 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MsmbO08540 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
MsmbO08540 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MsmbO08540 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
MsmbO08540 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MsmbO08540 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MsmbO08540 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
MsmbO08540 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
MsmbO08540 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
MsmbO08540 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
MsmbO08540 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MsmbO08540 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
MsmbO08540 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms