Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 H2af-ps-201ENSMUST00000119066 295 ntBASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC11.43□□□□□ -0.58
Gm10553J3QPF1 CT943659.1-201ENSMUST00000215459 326 ntBASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Thap2-203ENSMUST00000218989 527 ntBASIC11.43□□□□□ -0.58
Gm10553J3QPF1 AC225888.1-201ENSMUST00000227184 728 ntBASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Gm10553J3QPF1 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm10553J3QPF1 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm10553J3QPF1 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm10553J3QPF1 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm10553J3QPF1 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm10553J3QPF1 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm10553J3QPF1 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Gm10553J3QPF1 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Gm10553J3QPF1 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC11.42□□□□□ -0.58
Gm10553J3QPF1 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC11.42□□□□□ -0.58
Gm10553J3QPF1 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm10553J3QPF1 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Gm10553J3QPF1 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm10553J3QPF1 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Gm10553J3QPF1 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm10553J3QPF1 Gm4913-201ENSMUST00000117075 1290 ntBASIC11.42□□□□□ -0.58
Gm10553J3QPF1 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC11.42□□□□□ -0.58
Gm10553J3QPF1 Gm25911-201ENSMUST00000157621 56 ntBASIC11.42□□□□□ -0.58
Gm10553J3QPF1 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC11.42□□□□□ -0.58
Gm10553J3QPF1 Gm37935-201ENSMUST00000192012 982 ntBASIC11.42□□□□□ -0.58
Gm10553J3QPF1 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC11.42□□□□□ -0.58
Gm10553J3QPF1 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Gm10553J3QPF1 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm10553J3QPF1 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm10553J3QPF1 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm10553J3QPF1 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm10553J3QPF1 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm10553J3QPF1 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm10553J3QPF1 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Gm10553J3QPF1 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm10553J3QPF1 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm10553J3QPF1 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm10553J3QPF1 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm10553J3QPF1 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm10553J3QPF1 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Gm10553J3QPF1 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm10553J3QPF1 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm10553J3QPF1 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm10553J3QPF1 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm10553J3QPF1 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Gm10553J3QPF1 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Gm10553J3QPF1 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm10553J3QPF1 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm10553J3QPF1 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm10553J3QPF1 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm10553J3QPF1 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm10553J3QPF1 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm10553J3QPF1 Gm38058-201ENSMUST00000194323 4368 ntBASIC11.41□□□□□ -0.58
Gm10553J3QPF1 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gm10553J3QPF1 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm10553J3QPF1 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms