Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc149F6V035 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc149F6V035 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc149F6V035 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc149F6V035 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc149F6V035 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc149F6V035 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc149F6V035 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc149F6V035 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc149F6V035 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc149F6V035 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc149F6V035 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Ccdc149F6V035 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc149F6V035 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc149F6V035 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Ccdc149F6V035 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc149F6V035 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc149F6V035 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc149F6V035 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc149F6V035 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc149F6V035 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.15■□□□□ 0.02
Ccdc149F6V035 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc149F6V035 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc149F6V035 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.15■□□□□ 0.02
Ccdc149F6V035 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc149F6V035 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc149F6V035 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc149F6V035 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc149F6V035 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc149F6V035 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc149F6V035 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ccdc149F6V035 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc149F6V035 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc149F6V035 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc149F6V035 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc149F6V035 AC159621.2-201ENSMUST00000223519 1326 ntBASIC15.15■□□□□ 0.02
Ccdc149F6V035 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Ccdc149F6V035 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc149F6V035 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.14■□□□□ 0.01
Ccdc149F6V035 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc149F6V035 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc149F6V035 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc149F6V035 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc149F6V035 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Ccdc149F6V035 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc149F6V035 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc149F6V035 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc149F6V035 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc149F6V035 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc149F6V035 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.14■□□□□ 0.01
Ccdc149F6V035 Gm15693-201ENSMUST00000120470 637 ntBASIC15.14■□□□□ 0.01
Ccdc149F6V035 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Ccdc149F6V035 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc149F6V035 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.14■□□□□ 0.01
Ccdc149F6V035 Gm18049-201ENSMUST00000208909 581 ntBASIC15.14■□□□□ 0.01
Ccdc149F6V035 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc149F6V035 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc149F6V035 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc149F6V035 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc149F6V035 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.14■□□□□ 0.01
Ccdc149F6V035 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc149F6V035 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc149F6V035 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc149F6V035 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc149F6V035 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc149F6V035 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc149F6V035 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc149F6V035 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Ccdc149F6V035 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.14■□□□□ 0.01
Ccdc149F6V035 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc149F6V035 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc149F6V035 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc149F6V035 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc149F6V035 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Ccdc149F6V035 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Ccdc149F6V035 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc149F6V035 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc149F6V035 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.13■□□□□ 0.01
Ccdc149F6V035 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc149F6V035 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ccdc149F6V035 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc149F6V035 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ccdc149F6V035 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc149F6V035 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc149F6V035 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Ccdc149F6V035 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Ccdc149F6V035 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Ccdc149F6V035 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc149F6V035 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
Ccdc149F6V035 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.13■□□□□ 0.01
Ccdc149F6V035 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ccdc149F6V035 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.13■□□□□ 0.01
Ccdc149F6V035 Gm27622-201ENSMUST00000183779 60 ntBASIC15.13■□□□□ 0.01
Ccdc149F6V035 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.13■□□□□ 0.01
Ccdc149F6V035 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Ccdc149F6V035 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc149F6V035 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.13■□□□□ 0.01
Ccdc149F6V035 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc149F6V035 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc149F6V035 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms