Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scaf11E9PZM7 Gm12329-201ENSMUST00000120829 1007 ntBASIC20.57■□□□□ 0.88
Scaf11E9PZM7 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC20.57■□□□□ 0.88
Scaf11E9PZM7 Gm4959-201ENSMUST00000197271 1044 ntBASIC20.57■□□□□ 0.88
Scaf11E9PZM7 Gm44974-201ENSMUST00000206387 1279 ntBASIC20.57■□□□□ 0.88
Scaf11E9PZM7 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
Scaf11E9PZM7 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Scaf11E9PZM7 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scaf11E9PZM7 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Scaf11E9PZM7 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Scaf11E9PZM7 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scaf11E9PZM7 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scaf11E9PZM7 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scaf11E9PZM7 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scaf11E9PZM7 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scaf11E9PZM7 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC20.56■□□□□ 0.88
Scaf11E9PZM7 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scaf11E9PZM7 Trav4d-2-201ENSMUST00000120914 335 ntBASIC20.56■□□□□ 0.88
Scaf11E9PZM7 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Scaf11E9PZM7 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC20.56■□□□□ 0.88
Scaf11E9PZM7 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Scaf11E9PZM7 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scaf11E9PZM7 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scaf11E9PZM7 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Scaf11E9PZM7 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scaf11E9PZM7 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scaf11E9PZM7 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scaf11E9PZM7 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Scaf11E9PZM7 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scaf11E9PZM7 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scaf11E9PZM7 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Scaf11E9PZM7 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC20.56■□□□□ 0.88
Scaf11E9PZM7 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Scaf11E9PZM7 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Scaf11E9PZM7 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.56■□□□□ 0.88
Scaf11E9PZM7 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC20.56■□□□□ 0.88
Scaf11E9PZM7 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC20.56■□□□□ 0.88
Scaf11E9PZM7 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scaf11E9PZM7 Gm4691-201ENSMUST00000182339 1000 ntBASIC20.56■□□□□ 0.88
Scaf11E9PZM7 Gm2451-201ENSMUST00000199447 999 ntBASIC20.56■□□□□ 0.88
Scaf11E9PZM7 Gm9728-201ENSMUST00000200197 1055 ntBASIC20.56■□□□□ 0.88
Scaf11E9PZM7 Gm10290-201ENSMUST00000200451 999 ntBASIC20.56■□□□□ 0.88
Scaf11E9PZM7 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
Scaf11E9PZM7 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Scaf11E9PZM7 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scaf11E9PZM7 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scaf11E9PZM7 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scaf11E9PZM7 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scaf11E9PZM7 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scaf11E9PZM7 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Scaf11E9PZM7 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scaf11E9PZM7 Tcf21-202ENSMUST00000218002 1788 ntBASIC20.55■□□□□ 0.88
Scaf11E9PZM7 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC20.55■□□□□ 0.88
Scaf11E9PZM7 App-207ENSMUST00000227737 2827 ntBASIC20.55■□□□□ 0.88
Scaf11E9PZM7 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scaf11E9PZM7 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scaf11E9PZM7 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scaf11E9PZM7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Scaf11E9PZM7 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC20.55■□□□□ 0.88
Scaf11E9PZM7 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scaf11E9PZM7 CT009713.10-202ENSMUST00000225734 696 ntBASIC20.55■□□□□ 0.88
Scaf11E9PZM7 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scaf11E9PZM7 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scaf11E9PZM7 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scaf11E9PZM7 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Scaf11E9PZM7 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scaf11E9PZM7 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scaf11E9PZM7 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scaf11E9PZM7 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scaf11E9PZM7 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC20.54■□□□□ 0.88
Scaf11E9PZM7 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scaf11E9PZM7 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scaf11E9PZM7 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scaf11E9PZM7 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Scaf11E9PZM7 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Scaf11E9PZM7 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC20.54■□□□□ 0.88
Scaf11E9PZM7 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Scaf11E9PZM7 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
Scaf11E9PZM7 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Scaf11E9PZM7 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Scaf11E9PZM7 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Scaf11E9PZM7 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scaf11E9PZM7 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Scaf11E9PZM7 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Scaf11E9PZM7 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC20.54■□□□□ 0.88
Scaf11E9PZM7 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scaf11E9PZM7 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scaf11E9PZM7 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scaf11E9PZM7 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC20.53■□□□□ 0.88
Scaf11E9PZM7 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Scaf11E9PZM7 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scaf11E9PZM7 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC20.53■□□□□ 0.88
Scaf11E9PZM7 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scaf11E9PZM7 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scaf11E9PZM7 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Scaf11E9PZM7 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scaf11E9PZM7 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scaf11E9PZM7 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC20.53■□□□□ 0.88
Scaf11E9PZM7 Mir3547-201ENSMUST00000175461 88 ntBASIC20.53■□□□□ 0.88
Scaf11E9PZM7 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms