Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.03■□□□□ -0
Gm28043E0CXC2 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.03■□□□□ -0
Gm28043E0CXC2 Gm18622-201ENSMUST00000219361 595 ntBASIC15.03■□□□□ -0
Gm28043E0CXC2 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Gm28043E0CXC2 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.03■□□□□ -0
Gm28043E0CXC2 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm28043E0CXC2 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm28043E0CXC2 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Gm28043E0CXC2 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm28043E0CXC2 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm28043E0CXC2 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Gm28043E0CXC2 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm28043E0CXC2 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Gm28043E0CXC2 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.03■□□□□ -0
Gm28043E0CXC2 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Gm28043E0CXC2 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm28043E0CXC2 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Gm28043E0CXC2 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Gm28043E0CXC2 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Gm28043E0CXC2 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.02■□□□□ -0
Gm28043E0CXC2 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC15.02■□□□□ -0
Gm28043E0CXC2 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.02■□□□□ -0
Gm28043E0CXC2 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.02■□□□□ -0
Gm28043E0CXC2 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Gm28043E0CXC2 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Gm28043E0CXC2 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Gm28043E0CXC2 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.02■□□□□ -0
Gm28043E0CXC2 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Gm28043E0CXC2 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Gm28043E0CXC2 Gm7153-201ENSMUST00000117092 455 ntBASIC15.02■□□□□ -0
Gm28043E0CXC2 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Gm28043E0CXC2 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.02■□□□□ -0
Gm28043E0CXC2 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Gm28043E0CXC2 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.02■□□□□ -0
Gm28043E0CXC2 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Gm28043E0CXC2 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Gm28043E0CXC2 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC15.02□□□□□ -0.01
Gm28043E0CXC2 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Gm28043E0CXC2 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Gm28043E0CXC2 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Gm28043E0CXC2 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Gm28043E0CXC2 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Gm28043E0CXC2 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Gm28043E0CXC2 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Gm28043E0CXC2 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.02□□□□□ -0.01
Gm28043E0CXC2 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Gm28043E0CXC2 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Gm28043E0CXC2 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm28043E0CXC2 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm28043E0CXC2 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm28043E0CXC2 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm28043E0CXC2 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.01□□□□□ -0.01
Gm28043E0CXC2 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.01□□□□□ -0.01
Gm28043E0CXC2 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Gm28043E0CXC2 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.01□□□□□ -0.01
Gm28043E0CXC2 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Gm28043E0CXC2 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.01□□□□□ -0.01
Gm28043E0CXC2 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.01□□□□□ -0.01
Gm28043E0CXC2 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm28043E0CXC2 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm28043E0CXC2 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm28043E0CXC2 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Gm28043E0CXC2 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm28043E0CXC2 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Gm28043E0CXC2 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm28043E0CXC2 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm28043E0CXC2 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Gm28043E0CXC2 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Gm28043E0CXC2 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm28043E0CXC2 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm28043E0CXC2 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm28043E0CXC2 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Gm28043E0CXC2 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gm28043E0CXC2 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15□□□□□ -0.01
Gm28043E0CXC2 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15□□□□□ -0.01
Gm28043E0CXC2 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gm28043E0CXC2 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Gm28043E0CXC2 Gm8097-201ENSMUST00000117903 829 ntBASIC15□□□□□ -0.01
Gm28043E0CXC2 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gm28043E0CXC2 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15□□□□□ -0.01
Gm28043E0CXC2 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15□□□□□ -0.01
Gm28043E0CXC2 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15□□□□□ -0.01
Gm28043E0CXC2 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Gm28043E0CXC2 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gm28043E0CXC2 Gm38577-201ENSMUST00000221531 4545 ntBASIC15□□□□□ -0.01
Gm28043E0CXC2 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15□□□□□ -0.01
Gm28043E0CXC2 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gm28043E0CXC2 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Gm28043E0CXC2 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gm28043E0CXC2 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15□□□□□ -0.01
Gm28043E0CXC2 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gm28043E0CXC2 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gm28043E0CXC2 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Gm28043E0CXC2 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gm28043E0CXC2 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15□□□□□ -0.01
Gm28043E0CXC2 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gm28043E0CXC2 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gm28043E0CXC2 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15□□□□□ -0.01
Gm28043E0CXC2 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15□□□□□ -0.01
Gm28043E0CXC2 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms