Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim30cD3YVI9 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim30cD3YVI9 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim30cD3YVI9 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim30cD3YVI9 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim30cD3YVI9 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim30cD3YVI9 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC16.37■□□□□ 0.21
Trim30cD3YVI9 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim30cD3YVI9 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.36■□□□□ 0.21
Trim30cD3YVI9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim30cD3YVI9 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim30cD3YVI9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Trim30cD3YVI9 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim30cD3YVI9 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim30cD3YVI9 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim30cD3YVI9 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim30cD3YVI9 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim30cD3YVI9 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.36■□□□□ 0.21
Trim30cD3YVI9 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim30cD3YVI9 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Trim30cD3YVI9 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim30cD3YVI9 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim30cD3YVI9 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.36■□□□□ 0.21
Trim30cD3YVI9 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.36■□□□□ 0.21
Trim30cD3YVI9 Gm10060-201ENSMUST00000212002 111 ntBASIC16.36■□□□□ 0.21
Trim30cD3YVI9 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim30cD3YVI9 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim30cD3YVI9 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim30cD3YVI9 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.36■□□□□ 0.21
Trim30cD3YVI9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim30cD3YVI9 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim30cD3YVI9 Gm45779-201ENSMUST00000212189 4064 ntBASIC16.36■□□□□ 0.21
Trim30cD3YVI9 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim30cD3YVI9 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim30cD3YVI9 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim30cD3YVI9 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim30cD3YVI9 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.35■□□□□ 0.21
Trim30cD3YVI9 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Trim30cD3YVI9 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim30cD3YVI9 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim30cD3YVI9 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim30cD3YVI9 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim30cD3YVI9 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim30cD3YVI9 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim30cD3YVI9 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim30cD3YVI9 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.35■□□□□ 0.21
Trim30cD3YVI9 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.35■□□□□ 0.21
Trim30cD3YVI9 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim30cD3YVI9 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim30cD3YVI9 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim30cD3YVI9 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.35■□□□□ 0.21
Trim30cD3YVI9 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim30cD3YVI9 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim30cD3YVI9 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Trim30cD3YVI9 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.35■□□□□ 0.21
Trim30cD3YVI9 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim30cD3YVI9 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.35■□□□□ 0.21
Trim30cD3YVI9 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim30cD3YVI9 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Trim30cD3YVI9 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Trim30cD3YVI9 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim30cD3YVI9 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim30cD3YVI9 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trim30cD3YVI9 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim30cD3YVI9 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim30cD3YVI9 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.34■□□□□ 0.21
Trim30cD3YVI9 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim30cD3YVI9 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim30cD3YVI9 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim30cD3YVI9 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trim30cD3YVI9 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.34■□□□□ 0.21
Trim30cD3YVI9 Gm18733-201ENSMUST00000173950 856 ntBASIC16.34■□□□□ 0.21
Trim30cD3YVI9 Gm44771-201ENSMUST00000206975 626 ntBASIC16.34■□□□□ 0.21
Trim30cD3YVI9 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.34■□□□□ 0.21
Trim30cD3YVI9 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.34■□□□□ 0.21
Trim30cD3YVI9 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim30cD3YVI9 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim30cD3YVI9 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.34■□□□□ 0.21
Trim30cD3YVI9 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.34■□□□□ 0.21
Trim30cD3YVI9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim30cD3YVI9 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim30cD3YVI9 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim30cD3YVI9 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim30cD3YVI9 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim30cD3YVI9 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim30cD3YVI9 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.34■□□□□ 0.21
Trim30cD3YVI9 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim30cD3YVI9 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.34■□□□□ 0.21
Trim30cD3YVI9 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim30cD3YVI9 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim30cD3YVI9 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim30cD3YVI9 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Trim30cD3YVI9 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Trim30cD3YVI9 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim30cD3YVI9 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim30cD3YVI9 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim30cD3YVI9 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim30cD3YVI9 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trim30cD3YVI9 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trim30cD3YVI9 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms