Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clrn2B2RVW2 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Clrn2B2RVW2 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Clrn2B2RVW2 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Clrn2B2RVW2 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clrn2B2RVW2 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC17.25■□□□□ 0.35
Clrn2B2RVW2 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clrn2B2RVW2 Mir1897-201ENSMUST00000122581 272 ntBASIC17.25■□□□□ 0.35
Clrn2B2RVW2 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Clrn2B2RVW2 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Clrn2B2RVW2 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC17.25■□□□□ 0.35
Clrn2B2RVW2 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Clrn2B2RVW2 Gm6218-201ENSMUST00000219812 628 ntBASIC17.25■□□□□ 0.35
Clrn2B2RVW2 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clrn2B2RVW2 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clrn2B2RVW2 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clrn2B2RVW2 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clrn2B2RVW2 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clrn2B2RVW2 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clrn2B2RVW2 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clrn2B2RVW2 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clrn2B2RVW2 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clrn2B2RVW2 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clrn2B2RVW2 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Clrn2B2RVW2 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clrn2B2RVW2 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clrn2B2RVW2 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Clrn2B2RVW2 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clrn2B2RVW2 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clrn2B2RVW2 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.24■□□□□ 0.35
Clrn2B2RVW2 Gm15321-201ENSMUST00000121290 288 ntBASIC17.24■□□□□ 0.35
Clrn2B2RVW2 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Clrn2B2RVW2 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clrn2B2RVW2 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clrn2B2RVW2 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clrn2B2RVW2 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clrn2B2RVW2 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clrn2B2RVW2 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clrn2B2RVW2 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Clrn2B2RVW2 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clrn2B2RVW2 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Clrn2B2RVW2 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Clrn2B2RVW2 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Clrn2B2RVW2 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Clrn2B2RVW2 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clrn2B2RVW2 Gm5320-201ENSMUST00000207163 1519 ntBASIC17.23■□□□□ 0.35
Clrn2B2RVW2 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Clrn2B2RVW2 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Clrn2B2RVW2 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Clrn2B2RVW2 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clrn2B2RVW2 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clrn2B2RVW2 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Clrn2B2RVW2 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clrn2B2RVW2 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Clrn2B2RVW2 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clrn2B2RVW2 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Clrn2B2RVW2 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Clrn2B2RVW2 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clrn2B2RVW2 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clrn2B2RVW2 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clrn2B2RVW2 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clrn2B2RVW2 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clrn2B2RVW2 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clrn2B2RVW2 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.22■□□□□ 0.35
Clrn2B2RVW2 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clrn2B2RVW2 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Clrn2B2RVW2 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.22■□□□□ 0.35
Clrn2B2RVW2 Cd63-ps-201ENSMUST00000145417 875 ntBASIC17.22■□□□□ 0.35
Clrn2B2RVW2 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clrn2B2RVW2 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC17.22■□□□□ 0.35
Clrn2B2RVW2 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC17.22■□□□□ 0.35
Clrn2B2RVW2 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clrn2B2RVW2 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clrn2B2RVW2 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clrn2B2RVW2 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.22■□□□□ 0.35
Clrn2B2RVW2 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clrn2B2RVW2 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clrn2B2RVW2 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clrn2B2RVW2 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.21■□□□□ 0.35
Clrn2B2RVW2 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clrn2B2RVW2 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clrn2B2RVW2 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Clrn2B2RVW2 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Clrn2B2RVW2 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clrn2B2RVW2 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clrn2B2RVW2 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clrn2B2RVW2 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Clrn2B2RVW2 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.21■□□□□ 0.35
Clrn2B2RVW2 Gm29667-201ENSMUST00000190817 490 ntBASIC17.21■□□□□ 0.35
Clrn2B2RVW2 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC17.21■□□□□ 0.35
Clrn2B2RVW2 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clrn2B2RVW2 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clrn2B2RVW2 Prob1-201ENSMUST00000097619 3021 ntBASIC17.21■□□□□ 0.35
Clrn2B2RVW2 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Clrn2B2RVW2 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
Clrn2B2RVW2 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.21■□□□□ 0.34
Clrn2B2RVW2 Gm6263-201ENSMUST00000120029 1342 ntBASIC17.21■□□□□ 0.34
Clrn2B2RVW2 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clrn2B2RVW2 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clrn2B2RVW2 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms