Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col4a6B1AVK5 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col4a6B1AVK5 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col4a6B1AVK5 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col4a6B1AVK5 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Col4a6B1AVK5 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col4a6B1AVK5 Gm15824-201ENSMUST00000119516 955 ntBASIC15.15■□□□□ 0.02
Col4a6B1AVK5 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.15■□□□□ 0.02
Col4a6B1AVK5 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col4a6B1AVK5 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.15■□□□□ 0.02
Col4a6B1AVK5 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col4a6B1AVK5 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Col4a6B1AVK5 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Col4a6B1AVK5 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col4a6B1AVK5 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col4a6B1AVK5 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col4a6B1AVK5 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col4a6B1AVK5 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.15■□□□□ 0.02
Col4a6B1AVK5 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Col4a6B1AVK5 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col4a6B1AVK5 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col4a6B1AVK5 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col4a6B1AVK5 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col4a6B1AVK5 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col4a6B1AVK5 Gm15393-201ENSMUST00000120499 219 ntBASIC15.14■□□□□ 0.01
Col4a6B1AVK5 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col4a6B1AVK5 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col4a6B1AVK5 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Col4a6B1AVK5 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC15.14■□□□□ 0.01
Col4a6B1AVK5 Mir7654-201ENSMUST00000185082 70 ntBASIC15.14■□□□□ 0.01
Col4a6B1AVK5 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC15.14■□□□□ 0.01
Col4a6B1AVK5 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col4a6B1AVK5 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC15.14■□□□□ 0.01
Col4a6B1AVK5 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Col4a6B1AVK5 Gm7067-201ENSMUST00000207698 1249 ntBASIC15.14■□□□□ 0.01
Col4a6B1AVK5 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC15.14■□□□□ 0.01
Col4a6B1AVK5 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.14■□□□□ 0.01
Col4a6B1AVK5 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Col4a6B1AVK5 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col4a6B1AVK5 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col4a6B1AVK5 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col4a6B1AVK5 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col4a6B1AVK5 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.14■□□□□ 0.01
Col4a6B1AVK5 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Col4a6B1AVK5 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col4a6B1AVK5 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col4a6B1AVK5 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col4a6B1AVK5 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col4a6B1AVK5 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col4a6B1AVK5 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col4a6B1AVK5 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col4a6B1AVK5 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.13■□□□□ 0.01
Col4a6B1AVK5 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col4a6B1AVK5 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col4a6B1AVK5 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col4a6B1AVK5 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col4a6B1AVK5 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col4a6B1AVK5 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col4a6B1AVK5 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col4a6B1AVK5 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col4a6B1AVK5 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Col4a6B1AVK5 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.13■□□□□ 0.01
Col4a6B1AVK5 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col4a6B1AVK5 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col4a6B1AVK5 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col4a6B1AVK5 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col4a6B1AVK5 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col4a6B1AVK5 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC15.12■□□□□ 0.01
Col4a6B1AVK5 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col4a6B1AVK5 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.12■□□□□ 0.01
Col4a6B1AVK5 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Col4a6B1AVK5 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col4a6B1AVK5 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC15.12■□□□□ 0.01
Col4a6B1AVK5 AC154806.6-201ENSMUST00000228192 202 ntBASIC15.12■□□□□ 0.01
Col4a6B1AVK5 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col4a6B1AVK5 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col4a6B1AVK5 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col4a6B1AVK5 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col4a6B1AVK5 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col4a6B1AVK5 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col4a6B1AVK5 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col4a6B1AVK5 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col4a6B1AVK5 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col4a6B1AVK5 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col4a6B1AVK5 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col4a6B1AVK5 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col4a6B1AVK5 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col4a6B1AVK5 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col4a6B1AVK5 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Col4a6B1AVK5 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC15.12■□□□□ 0.01
Col4a6B1AVK5 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.12■□□□□ 0.01
Col4a6B1AVK5 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Col4a6B1AVK5 Gm2495-201ENSMUST00000191160 466 ntBASIC15.12■□□□□ 0.01
Col4a6B1AVK5 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col4a6B1AVK5 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col4a6B1AVK5 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col4a6B1AVK5 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col4a6B1AVK5 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.12■□□□□ 0.01
Col4a6B1AVK5 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col4a6B1AVK5 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms