Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 AC155258.1-201ENSMUST00000219303 253 ntBASIC7.74□□□□□ -1.17
Ubr4A2AN08 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ubr4A2AN08 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ubr4A2AN08 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Ubr4A2AN08 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC7.74□□□□□ -1.17
Ubr4A2AN08 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ubr4A2AN08 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ubr4A2AN08 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ubr4A2AN08 Gm2639-201ENSMUST00000156881 1297 ntBASIC7.74□□□□□ -1.17
Ubr4A2AN08 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ubr4A2AN08 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ubr4A2AN08 Gm45770-201ENSMUST00000212105 616 ntBASIC7.74□□□□□ -1.17
Ubr4A2AN08 Gm29705-201ENSMUST00000212598 474 ntBASIC7.74□□□□□ -1.17
Ubr4A2AN08 AC154462.2-201ENSMUST00000227519 370 ntBASIC7.74□□□□□ -1.17
Ubr4A2AN08 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ubr4A2AN08 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ubr4A2AN08 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ubr4A2AN08 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ubr4A2AN08 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ubr4A2AN08 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ubr4A2AN08 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC7.74□□□□□ -1.17
Ubr4A2AN08 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ubr4A2AN08 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ubr4A2AN08 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ubr4A2AN08 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ubr4A2AN08 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ubr4A2AN08 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ubr4A2AN08 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ubr4A2AN08 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ubr4A2AN08 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ubr4A2AN08 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ubr4A2AN08 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ubr4A2AN08 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ubr4A2AN08 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ubr4A2AN08 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ubr4A2AN08 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ubr4A2AN08 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC7.73□□□□□ -1.17
Ubr4A2AN08 AC155237.1-201ENSMUST00000226196 1279 ntBASIC7.73□□□□□ -1.17
Ubr4A2AN08 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ubr4A2AN08 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ubr4A2AN08 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC7.73□□□□□ -1.17
Ubr4A2AN08 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ubr4A2AN08 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ubr4A2AN08 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ubr4A2AN08 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ubr4A2AN08 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ubr4A2AN08 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ubr4A2AN08 Gm37008-201ENSMUST00000195712 319 ntBASIC7.73□□□□□ -1.17
Ubr4A2AN08 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ubr4A2AN08 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Ubr4A2AN08 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ubr4A2AN08 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC7.73□□□□□ -1.17
Ubr4A2AN08 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ubr4A2AN08 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ubr4A2AN08 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ubr4A2AN08 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ubr4A2AN08 Gm7541-201ENSMUST00000118361 535 ntBASIC7.73□□□□□ -1.17
Ubr4A2AN08 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ubr4A2AN08 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC7.73□□□□□ -1.17
Ubr4A2AN08 Gm7600-201ENSMUST00000209657 785 ntBASIC7.73□□□□□ -1.17
Ubr4A2AN08 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC7.73□□□□□ -1.17
Ubr4A2AN08 AC163667.3-201ENSMUST00000225774 222 ntBASIC7.73□□□□□ -1.17
Ubr4A2AN08 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ubr4A2AN08 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ubr4A2AN08 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ubr4A2AN08 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ubr4A2AN08 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ubr4A2AN08 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ubr4A2AN08 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ubr4A2AN08 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ubr4A2AN08 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ubr4A2AN08 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ubr4A2AN08 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ubr4A2AN08 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC7.73□□□□□ -1.17
Ubr4A2AN08 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ubr4A2AN08 Gm8318-201ENSMUST00000182954 872 ntBASIC7.73□□□□□ -1.17
Ubr4A2AN08 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ubr4A2AN08 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ubr4A2AN08 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC7.73□□□□□ -1.17
Ubr4A2AN08 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ubr4A2AN08 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC7.73□□□□□ -1.17
Ubr4A2AN08 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ubr4A2AN08 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ubr4A2AN08 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC7.72□□□□□ -1.17
Ubr4A2AN08 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ubr4A2AN08 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ubr4A2AN08 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC7.72□□□□□ -1.17
Ubr4A2AN08 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC7.72□□□□□ -1.17
Ubr4A2AN08 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ubr4A2AN08 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ubr4A2AN08 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC7.72□□□□□ -1.17
Ubr4A2AN08 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ubr4A2AN08 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ubr4A2AN08 Gm43006-201ENSMUST00000197702 1602 ntBASIC7.72□□□□□ -1.17
Ubr4A2AN08 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ubr4A2AN08 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC7.72□□□□□ -1.17
Ubr4A2AN08 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Ubr4A2AN08 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ubr4A2AN08 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ubr4A2AN08 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms