Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC23.13■■□□□ 1.29
Shroom2A2ALU4 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Shroom2A2ALU4 Gm4691-201ENSMUST00000182339 1000 ntBASIC23.13■■□□□ 1.29
Shroom2A2ALU4 Mir6979-201ENSMUST00000183927 56 ntBASIC23.13■■□□□ 1.29
Shroom2A2ALU4 Gm2451-201ENSMUST00000199447 999 ntBASIC23.13■■□□□ 1.29
Shroom2A2ALU4 Gm10290-201ENSMUST00000200451 999 ntBASIC23.13■■□□□ 1.29
Shroom2A2ALU4 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Shroom2A2ALU4 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Shroom2A2ALU4 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Shroom2A2ALU4 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Shroom2A2ALU4 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Shroom2A2ALU4 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Shroom2A2ALU4 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Shroom2A2ALU4 Gm15635-204ENSMUST00000208024 2539 ntBASIC23.12■■□□□ 1.29
Shroom2A2ALU4 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Shroom2A2ALU4 Gm45667-201ENSMUST00000210380 1316 ntBASIC23.12■■□□□ 1.29
Shroom2A2ALU4 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC23.12■■□□□ 1.29
Shroom2A2ALU4 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Shroom2A2ALU4 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Shroom2A2ALU4 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC23.12■■□□□ 1.29
Shroom2A2ALU4 Gm8598-201ENSMUST00000221184 836 ntBASIC23.12■■□□□ 1.29
Shroom2A2ALU4 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Shroom2A2ALU4 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Shroom2A2ALU4 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Shroom2A2ALU4 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Shroom2A2ALU4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Shroom2A2ALU4 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Shroom2A2ALU4 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Shroom2A2ALU4 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Shroom2A2ALU4 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC23.12■■□□□ 1.29
Shroom2A2ALU4 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Shroom2A2ALU4 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Shroom2A2ALU4 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC23.12■■□□□ 1.29
Shroom2A2ALU4 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
Shroom2A2ALU4 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Shroom2A2ALU4 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Shroom2A2ALU4 Gm5276-201ENSMUST00000196683 1047 ntBASIC23.11■■□□□ 1.29
Shroom2A2ALU4 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Shroom2A2ALU4 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Shroom2A2ALU4 Gm5425-201ENSMUST00000214125 459 ntBASIC23.11■■□□□ 1.29
Shroom2A2ALU4 AC140406.1-201ENSMUST00000226481 465 ntBASIC23.11■■□□□ 1.29
Shroom2A2ALU4 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Shroom2A2ALU4 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Shroom2A2ALU4 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC23.11■■□□□ 1.29
Shroom2A2ALU4 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Shroom2A2ALU4 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Shroom2A2ALU4 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC23.11■■□□□ 1.29
Shroom2A2ALU4 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Shroom2A2ALU4 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC23.11■■□□□ 1.29
Shroom2A2ALU4 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Shroom2A2ALU4 Gm42627-201ENSMUST00000197347 224 ntBASIC23.11■■□□□ 1.29
Shroom2A2ALU4 Gm9368-201ENSMUST00000219348 831 ntBASIC23.11■■□□□ 1.29
Shroom2A2ALU4 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Shroom2A2ALU4 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Shroom2A2ALU4 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Shroom2A2ALU4 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Shroom2A2ALU4 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Shroom2A2ALU4 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Shroom2A2ALU4 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Shroom2A2ALU4 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Shroom2A2ALU4 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC23.1■■□□□ 1.29
Shroom2A2ALU4 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Shroom2A2ALU4 Gm4804-201ENSMUST00000182234 999 ntBASIC23.1■■□□□ 1.29
Shroom2A2ALU4 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Shroom2A2ALU4 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Shroom2A2ALU4 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Shroom2A2ALU4 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Shroom2A2ALU4 Ntrk2-205ENSMUST00000224402 2284 ntBASIC23.09■■□□□ 1.29
Shroom2A2ALU4 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Shroom2A2ALU4 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Shroom2A2ALU4 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Shroom2A2ALU4 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Shroom2A2ALU4 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC23.09■■□□□ 1.29
Shroom2A2ALU4 Gm19078-201ENSMUST00000206311 727 ntBASIC23.09■■□□□ 1.29
Shroom2A2ALU4 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Shroom2A2ALU4 AC154806.6-201ENSMUST00000228192 202 ntBASIC23.09■■□□□ 1.29
Shroom2A2ALU4 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Shroom2A2ALU4 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Shroom2A2ALU4 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Shroom2A2ALU4 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Shroom2A2ALU4 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Shroom2A2ALU4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Shroom2A2ALU4 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC23.08■■□□□ 1.29
Shroom2A2ALU4 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Shroom2A2ALU4 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
Shroom2A2ALU4 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Shroom2A2ALU4 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
Shroom2A2ALU4 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Shroom2A2ALU4 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Shroom2A2ALU4 Gm18935-201ENSMUST00000212692 664 ntBASIC23.08■■□□□ 1.29
Shroom2A2ALU4 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC23.08■■□□□ 1.29
Shroom2A2ALU4 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Shroom2A2ALU4 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Shroom2A2ALU4 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC23.08■■□□□ 1.28
Shroom2A2ALU4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Shroom2A2ALU4 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC23.07■■□□□ 1.28
Shroom2A2ALU4 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Shroom2A2ALU4 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Shroom2A2ALU4 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Shroom2A2ALU4 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC23.07■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms