Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cfap99A0A140LIX9 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cfap99A0A140LIX9 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cfap99A0A140LIX9 Gm18889-201ENSMUST00000174284 929 ntBASIC17.88■□□□□ 0.45
Cfap99A0A140LIX9 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cfap99A0A140LIX9 Gm20949-201ENSMUST00000206478 952 ntBASIC17.88■□□□□ 0.45
Cfap99A0A140LIX9 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.88■□□□□ 0.45
Cfap99A0A140LIX9 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cfap99A0A140LIX9 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cfap99A0A140LIX9 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cfap99A0A140LIX9 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cfap99A0A140LIX9 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cfap99A0A140LIX9 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Cfap99A0A140LIX9 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cfap99A0A140LIX9 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cfap99A0A140LIX9 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cfap99A0A140LIX9 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Cfap99A0A140LIX9 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cfap99A0A140LIX9 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cfap99A0A140LIX9 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cfap99A0A140LIX9 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Cfap99A0A140LIX9 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cfap99A0A140LIX9 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cfap99A0A140LIX9 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Cfap99A0A140LIX9 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.87■□□□□ 0.45
Cfap99A0A140LIX9 Gm14722-201ENSMUST00000118943 689 ntBASIC17.87■□□□□ 0.45
Cfap99A0A140LIX9 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.87■□□□□ 0.45
Cfap99A0A140LIX9 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.87■□□□□ 0.45
Cfap99A0A140LIX9 Gm43474-201ENSMUST00000196415 774 ntBASIC17.87■□□□□ 0.45
Cfap99A0A140LIX9 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cfap99A0A140LIX9 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cfap99A0A140LIX9 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC17.87■□□□□ 0.45
Cfap99A0A140LIX9 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cfap99A0A140LIX9 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cfap99A0A140LIX9 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Cfap99A0A140LIX9 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cfap99A0A140LIX9 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cfap99A0A140LIX9 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cfap99A0A140LIX9 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.86■□□□□ 0.45
Cfap99A0A140LIX9 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cfap99A0A140LIX9 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cfap99A0A140LIX9 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cfap99A0A140LIX9 Mir7023-201ENSMUST00000185093 64 ntBASIC17.86■□□□□ 0.45
Cfap99A0A140LIX9 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.86■□□□□ 0.45
Cfap99A0A140LIX9 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.86■□□□□ 0.45
Cfap99A0A140LIX9 Gm5186-201ENSMUST00000218781 920 ntBASIC17.86■□□□□ 0.45
Cfap99A0A140LIX9 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.86■□□□□ 0.45
Cfap99A0A140LIX9 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cfap99A0A140LIX9 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cfap99A0A140LIX9 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cfap99A0A140LIX9 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cfap99A0A140LIX9 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cfap99A0A140LIX9 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cfap99A0A140LIX9 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.86■□□□□ 0.45
Cfap99A0A140LIX9 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Cfap99A0A140LIX9 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cfap99A0A140LIX9 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cfap99A0A140LIX9 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cfap99A0A140LIX9 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cfap99A0A140LIX9 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cfap99A0A140LIX9 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cfap99A0A140LIX9 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cfap99A0A140LIX9 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cfap99A0A140LIX9 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.85■□□□□ 0.45
Cfap99A0A140LIX9 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Cfap99A0A140LIX9 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.85■□□□□ 0.45
Cfap99A0A140LIX9 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.85■□□□□ 0.45
Cfap99A0A140LIX9 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.85■□□□□ 0.45
Cfap99A0A140LIX9 Gm25948-201ENSMUST00000175334 112 ntBASIC17.85■□□□□ 0.45
Cfap99A0A140LIX9 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.85■□□□□ 0.45
Cfap99A0A140LIX9 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.85■□□□□ 0.45
Cfap99A0A140LIX9 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Cfap99A0A140LIX9 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cfap99A0A140LIX9 Gm20553-201ENSMUST00000204205 844 ntBASIC17.85■□□□□ 0.45
Cfap99A0A140LIX9 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.85■□□□□ 0.45
Cfap99A0A140LIX9 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.85■□□□□ 0.45
Cfap99A0A140LIX9 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.85■□□□□ 0.45
Cfap99A0A140LIX9 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cfap99A0A140LIX9 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Cfap99A0A140LIX9 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cfap99A0A140LIX9 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Cfap99A0A140LIX9 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cfap99A0A140LIX9 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cfap99A0A140LIX9 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cfap99A0A140LIX9 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cfap99A0A140LIX9 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Cfap99A0A140LIX9 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cfap99A0A140LIX9 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cfap99A0A140LIX9 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Cfap99A0A140LIX9 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cfap99A0A140LIX9 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cfap99A0A140LIX9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cfap99A0A140LIX9 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cfap99A0A140LIX9 Grk6-207ENSMUST00000225925 2769 ntBASIC17.84■□□□□ 0.45
Cfap99A0A140LIX9 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
Cfap99A0A140LIX9 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Cfap99A0A140LIX9 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.84■□□□□ 0.45
Cfap99A0A140LIX9 Gm12008-201ENSMUST00000117791 755 ntBASIC17.84■□□□□ 0.45
Cfap99A0A140LIX9 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cfap99A0A140LIX9 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms