Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc194A0A140LIT1 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc194A0A140LIT1 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc194A0A140LIT1 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc194A0A140LIT1 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc194A0A140LIT1 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc194A0A140LIT1 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc194A0A140LIT1 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 Gm43347-201ENSMUST00000200226 580 ntBASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc194A0A140LIT1 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc194A0A140LIT1 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc194A0A140LIT1 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc194A0A140LIT1 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc194A0A140LIT1 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ccdc194A0A140LIT1 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc194A0A140LIT1 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc194A0A140LIT1 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc194A0A140LIT1 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc194A0A140LIT1 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc194A0A140LIT1 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc194A0A140LIT1 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc194A0A140LIT1 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc194A0A140LIT1 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Ccdc194A0A140LIT1 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.87□□□□□ -0.03
Ccdc194A0A140LIT1 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc194A0A140LIT1 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.87□□□□□ -0.03
Ccdc194A0A140LIT1 Gm37153-201ENSMUST00000193637 231 ntBASIC14.87□□□□□ -0.03
Ccdc194A0A140LIT1 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.87□□□□□ -0.03
Ccdc194A0A140LIT1 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.87□□□□□ -0.03
Ccdc194A0A140LIT1 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc194A0A140LIT1 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc194A0A140LIT1 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc194A0A140LIT1 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ccdc194A0A140LIT1 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc194A0A140LIT1 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc194A0A140LIT1 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc194A0A140LIT1 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc194A0A140LIT1 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc194A0A140LIT1 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc194A0A140LIT1 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc194A0A140LIT1 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Ccdc194A0A140LIT1 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc194A0A140LIT1 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc194A0A140LIT1 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc194A0A140LIT1 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc194A0A140LIT1 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc194A0A140LIT1 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ccdc194A0A140LIT1 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc194A0A140LIT1 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc194A0A140LIT1 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc194A0A140LIT1 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc194A0A140LIT1 Gm28033-201ENSMUST00000184224 96 ntBASIC14.86□□□□□ -0.03
Ccdc194A0A140LIT1 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.86□□□□□ -0.03
Ccdc194A0A140LIT1 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc194A0A140LIT1 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Ccdc194A0A140LIT1 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc194A0A140LIT1 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ccdc194A0A140LIT1 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc194A0A140LIT1 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc194A0A140LIT1 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc194A0A140LIT1 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc194A0A140LIT1 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms