Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC11.35□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC11.35□□□□□ -0.59
Trav3n-3A0A0G2JEM0 AC114585.2-202ENSMUST00000228094 426 ntBASIC11.35□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.35□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3n-3A0A0G2JEM0 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3n-3A0A0G2JEM0 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trav3n-3A0A0G2JEM0 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Trav3n-3A0A0G2JEM0 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Gm11355-201ENSMUST00000121120 306 ntBASIC11.34□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.34□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Gm42471-201ENSMUST00000201457 1865 ntBASIC11.34□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.33□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC11.33□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3n-3A0A0G2JEM0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC11.33□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Gm27011-201ENSMUST00000182352 972 ntBASIC11.33□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Mir6404-201ENSMUST00000183699 94 ntBASIC11.33□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Gm37722-201ENSMUST00000193757 208 ntBASIC11.33□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3n-3A0A0G2JEM0 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms