Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-2A0A0G2JDP3 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-2A0A0G2JDP3 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC10.88□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Gm10060-201ENSMUST00000212002 111 ntBASIC10.88□□□□□ -0.67
Trav9n-2A0A0G2JDP3 CT009510.1-201ENSMUST00000227972 270 ntBASIC10.88□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC10.87□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC10.87□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Gm5184-201ENSMUST00000220417 1702 ntBASIC10.87□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-2A0A0G2JDP3 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC10.87□□□□□ -0.67
Trav9n-2A0A0G2JDP3 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC10.87□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Celf4-206ENSMUST00000224553 1729 ntBASIC10.87□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC10.86□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC10.86□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC10.86□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC10.86□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Gm45167-201ENSMUST00000208007 322 ntBASIC10.86□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms