Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm8242-201ENSMUST00000193029 1420 ntBASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm43509-201ENSMUST00000196551 2594 ntBASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm12134-201ENSMUST00000122109 520 ntBASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm7286-201ENSMUST00000182691 1007 ntBASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm29518-201ENSMUST00000190858 372 ntBASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm30437-201ENSMUST00000206086 1201 ntBASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Vti1a-206ENSMUST00000225529 1244 ntBASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm14722-201ENSMUST00000118943 689 ntBASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms