Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav17A0A075B655 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav17A0A075B655 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav17A0A075B655 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav17A0A075B655 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav17A0A075B655 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav17A0A075B655 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav17A0A075B655 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav17A0A075B655 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav17A0A075B655 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav17A0A075B655 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav17A0A075B655 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav17A0A075B655 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav17A0A075B655 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav17A0A075B655 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.51
Trav17A0A075B655 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav17A0A075B655 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav17A0A075B655 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav17A0A075B655 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav17A0A075B655 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav17A0A075B655 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav17A0A075B655 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav17A0A075B655 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav17A0A075B655 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav17A0A075B655 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav17A0A075B655 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav17A0A075B655 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav17A0A075B655 Gm43205-201ENSMUST00000198622 1968 ntBASIC11.89□□□□□ -0.51
Trav17A0A075B655 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav17A0A075B655 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav17A0A075B655 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav17A0A075B655 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav17A0A075B655 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav17A0A075B655 Gm23547-201ENSMUST00000158210 271 ntBASIC11.89□□□□□ -0.51
Trav17A0A075B655 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
Trav17A0A075B655 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC11.89□□□□□ -0.51
Trav17A0A075B655 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav17A0A075B655 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Trav17A0A075B655 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav17A0A075B655 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav17A0A075B655 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav17A0A075B655 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav17A0A075B655 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav17A0A075B655 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav17A0A075B655 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav17A0A075B655 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav17A0A075B655 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav17A0A075B655 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav17A0A075B655 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav17A0A075B655 Gm9856-201ENSMUST00000217077 2578 ntBASIC11.88□□□□□ -0.51
Trav17A0A075B655 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav17A0A075B655 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav17A0A075B655 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav17A0A075B655 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav17A0A075B655 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Trav17A0A075B655 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav17A0A075B655 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav17A0A075B655 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav17A0A075B655 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav17A0A075B655 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav17A0A075B655 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav17A0A075B655 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav17A0A075B655 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav17A0A075B655 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav17A0A075B655 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Trav17A0A075B655 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Trav17A0A075B655 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav17A0A075B655 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav17A0A075B655 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav17A0A075B655 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav17A0A075B655 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav17A0A075B655 CT009510.1-201ENSMUST00000227972 270 ntBASIC11.88□□□□□ -0.51
Trav17A0A075B655 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav17A0A075B655 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav17A0A075B655 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav17A0A075B655 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav17A0A075B655 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav17A0A075B655 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav17A0A075B655 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav17A0A075B655 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Trav17A0A075B655 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav17A0A075B655 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav17A0A075B655 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.88□□□□□ -0.51
Trav17A0A075B655 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav17A0A075B655 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav17A0A075B655 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav17A0A075B655 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms