Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.73□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.73□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.73□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.73□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.73□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.72□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.72□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.72□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 AA414768-201ENSMUST00000121924 1257 ntBASIC12.72□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.72□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Gm8655-201ENSMUST00000221159 852 ntBASIC12.72□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.72□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.71□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Gm15358-201ENSMUST00000119249 520 ntBASIC12.71□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Olfr129-201ENSMUST00000122318 993 ntBASIC12.71□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Gm23634-201ENSMUST00000175071 91 ntBASIC12.71□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Gm27742-201ENSMUST00000184667 60 ntBASIC12.71□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.71□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.71□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms