Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Trav7n-4A0A075B620 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7n-4A0A075B620 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7n-4A0A075B620 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7n-4A0A075B620 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7n-4A0A075B620 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7n-4A0A075B620 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7n-4A0A075B620 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7n-4A0A075B620 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7n-4A0A075B620 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7n-4A0A075B620 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7n-4A0A075B620 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7n-4A0A075B620 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC11.33□□□□□ -0.6
Trav7n-4A0A075B620 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC11.33□□□□□ -0.6
Trav7n-4A0A075B620 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7n-4A0A075B620 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7n-4A0A075B620 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7n-4A0A075B620 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7n-4A0A075B620 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7n-4A0A075B620 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7n-4A0A075B620 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7n-4A0A075B620 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7n-4A0A075B620 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7n-4A0A075B620 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav7n-4A0A075B620 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav7n-4A0A075B620 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7n-4A0A075B620 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7n-4A0A075B620 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7n-4A0A075B620 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC11.33□□□□□ -0.6
Trav7n-4A0A075B620 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7n-4A0A075B620 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7n-4A0A075B620 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7n-4A0A075B620 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7n-4A0A075B620 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7n-4A0A075B620 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav7n-4A0A075B620 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7n-4A0A075B620 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7n-4A0A075B620 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7n-4A0A075B620 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7n-4A0A075B620 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7n-4A0A075B620 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7n-4A0A075B620 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7n-4A0A075B620 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav7n-4A0A075B620 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7n-4A0A075B620 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7n-4A0A075B620 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7n-4A0A075B620 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav7n-4A0A075B620 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7n-4A0A075B620 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav7n-4A0A075B620 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7n-4A0A075B620 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7n-4A0A075B620 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav7n-4A0A075B620 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav7n-4A0A075B620 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav7n-4A0A075B620 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC11.32□□□□□ -0.6
Trav7n-4A0A075B620 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav7n-4A0A075B620 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7n-4A0A075B620 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7n-4A0A075B620 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav7n-4A0A075B620 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav7n-4A0A075B620 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7n-4A0A075B620 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7n-4A0A075B620 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7n-4A0A075B620 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7n-4A0A075B620 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7n-4A0A075B620 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.32□□□□□ -0.6
Trav7n-4A0A075B620 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Gm2274-201ENSMUST00000184539 609 ntBASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Celf4-206ENSMUST00000224553 1729 ntBASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms