Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.02□□□□□ -0.48
Trav6-1A0A075B5Z8 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6-1A0A075B5Z8 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6-1A0A075B5Z8 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6-1A0A075B5Z8 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-1A0A075B5Z8 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-1A0A075B5Z8 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-1A0A075B5Z8 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-1A0A075B5Z8 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-1A0A075B5Z8 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-1A0A075B5Z8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav6-1A0A075B5Z8 Gm10499-201ENSMUST00000174094 934 ntBASIC12.02□□□□□ -0.49
Trav6-1A0A075B5Z8 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav6-1A0A075B5Z8 Gm27867-201ENSMUST00000184778 125 ntBASIC12.02□□□□□ -0.49
Trav6-1A0A075B5Z8 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.02□□□□□ -0.49
Trav6-1A0A075B5Z8 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-1A0A075B5Z8 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-1A0A075B5Z8 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-1A0A075B5Z8 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-1A0A075B5Z8 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-1A0A075B5Z8 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-1A0A075B5Z8 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-1A0A075B5Z8 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-1A0A075B5Z8 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav6-1A0A075B5Z8 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-1A0A075B5Z8 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-1A0A075B5Z8 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Trav6-1A0A075B5Z8 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav6-1A0A075B5Z8 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trav6-1A0A075B5Z8 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-1A0A075B5Z8 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-1A0A075B5Z8 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-1A0A075B5Z8 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-1A0A075B5Z8 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-1A0A075B5Z8 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-1A0A075B5Z8 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-1A0A075B5Z8 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-1A0A075B5Z8 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trav6-1A0A075B5Z8 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-1A0A075B5Z8 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-1A0A075B5Z8 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-1A0A075B5Z8 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-1A0A075B5Z8 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-1A0A075B5Z8 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-1A0A075B5Z8 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-1A0A075B5Z8 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-1A0A075B5Z8 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav6-1A0A075B5Z8 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-1A0A075B5Z8 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-1A0A075B5Z8 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.01□□□□□ -0.49
Trav6-1A0A075B5Z8 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav6-1A0A075B5Z8 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.01□□□□□ -0.49
Trav6-1A0A075B5Z8 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-1A0A075B5Z8 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-1A0A075B5Z8 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-1A0A075B5Z8 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.01□□□□□ -0.49
Trav6-1A0A075B5Z8 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-1A0A075B5Z8 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.01□□□□□ -0.49
Trav6-1A0A075B5Z8 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-1A0A075B5Z8 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-1A0A075B5Z8 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav6-1A0A075B5Z8 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav6-1A0A075B5Z8 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-1A0A075B5Z8 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-1A0A075B5Z8 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-1A0A075B5Z8 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12□□□□□ -0.49
Trav6-1A0A075B5Z8 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav6-1A0A075B5Z8 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Trav6-1A0A075B5Z8 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Trav6-1A0A075B5Z8 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav6-1A0A075B5Z8 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-1A0A075B5Z8 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-1A0A075B5Z8 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-1A0A075B5Z8 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav6-1A0A075B5Z8 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12□□□□□ -0.49
Trav6-1A0A075B5Z8 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12□□□□□ -0.49
Trav6-1A0A075B5Z8 Gm8097-201ENSMUST00000117903 829 ntBASIC12□□□□□ -0.49
Trav6-1A0A075B5Z8 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Trav6-1A0A075B5Z8 AA414768-201ENSMUST00000121924 1257 ntBASIC12□□□□□ -0.49
Trav6-1A0A075B5Z8 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav6-1A0A075B5Z8 Gm23634-201ENSMUST00000175071 91 ntBASIC12□□□□□ -0.49
Trav6-1A0A075B5Z8 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-1A0A075B5Z8 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Trav6-1A0A075B5Z8 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12□□□□□ -0.49
Trav6-1A0A075B5Z8 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Trav6-1A0A075B5Z8 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Trav6-1A0A075B5Z8 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12□□□□□ -0.49
Trav6-1A0A075B5Z8 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-1A0A075B5Z8 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav6-1A0A075B5Z8 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12□□□□□ -0.49
Trav6-1A0A075B5Z8 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-1A0A075B5Z8 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav6-1A0A075B5Z8 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-1A0A075B5Z8 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-1A0A075B5Z8 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-1A0A075B5Z8 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-1A0A075B5Z8 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav6-1A0A075B5Z8 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-1A0A075B5Z8 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-1A0A075B5Z8 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms