Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PdfS4R2K0 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PdfS4R2K0 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
PdfS4R2K0 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
PdfS4R2K0 Gm11860-201ENSMUST00000122346 1010 ntBASIC11.53□□□□□ -0.56
PdfS4R2K0 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC11.53□□□□□ -0.56
PdfS4R2K0 Gm6623-201ENSMUST00000173570 544 ntBASIC11.53□□□□□ -0.56
PdfS4R2K0 Gm27704-201ENSMUST00000185094 107 ntBASIC11.53□□□□□ -0.56
PdfS4R2K0 Gm17808-201ENSMUST00000200859 894 ntBASIC11.53□□□□□ -0.56
PdfS4R2K0 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
PdfS4R2K0 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PdfS4R2K0 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PdfS4R2K0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PdfS4R2K0 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PdfS4R2K0 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
PdfS4R2K0 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
PdfS4R2K0 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
PdfS4R2K0 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
PdfS4R2K0 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PdfS4R2K0 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
PdfS4R2K0 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PdfS4R2K0 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PdfS4R2K0 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PdfS4R2K0 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
PdfS4R2K0 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PdfS4R2K0 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PdfS4R2K0 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
PdfS4R2K0 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
PdfS4R2K0 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
PdfS4R2K0 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
PdfS4R2K0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
PdfS4R2K0 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC11.52□□□□□ -0.56
PdfS4R2K0 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
PdfS4R2K0 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.56
PdfS4R2K0 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
PdfS4R2K0 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
PdfS4R2K0 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.52□□□□□ -0.56
PdfS4R2K0 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.56
PdfS4R2K0 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PdfS4R2K0 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
PdfS4R2K0 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PdfS4R2K0 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PdfS4R2K0 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PdfS4R2K0 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC11.52□□□□□ -0.57
PdfS4R2K0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
PdfS4R2K0 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC11.52□□□□□ -0.57
PdfS4R2K0 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
PdfS4R2K0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC11.52□□□□□ -0.57
PdfS4R2K0 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC11.52□□□□□ -0.57
PdfS4R2K0 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.52□□□□□ -0.57
PdfS4R2K0 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
PdfS4R2K0 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
PdfS4R2K0 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
PdfS4R2K0 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PdfS4R2K0 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PdfS4R2K0 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PdfS4R2K0 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PdfS4R2K0 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
PdfS4R2K0 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PdfS4R2K0 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
PdfS4R2K0 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.52□□□□□ -0.57
PdfS4R2K0 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PdfS4R2K0 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PdfS4R2K0 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PdfS4R2K0 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PdfS4R2K0 Gm6858-201ENSMUST00000208582 1468 ntBASIC11.51□□□□□ -0.57
PdfS4R2K0 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.51□□□□□ -0.57
PdfS4R2K0 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PdfS4R2K0 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
PdfS4R2K0 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
PdfS4R2K0 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PdfS4R2K0 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
PdfS4R2K0 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.51□□□□□ -0.57
PdfS4R2K0 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
PdfS4R2K0 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
PdfS4R2K0 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.51□□□□□ -0.57
PdfS4R2K0 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
PdfS4R2K0 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
PdfS4R2K0 Gm7284-201ENSMUST00000131667 944 ntBASIC11.51□□□□□ -0.57
PdfS4R2K0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC11.51□□□□□ -0.57
PdfS4R2K0 Gm3272-201ENSMUST00000181181 1229 ntBASIC11.51□□□□□ -0.57
PdfS4R2K0 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
PdfS4R2K0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC11.51□□□□□ -0.57
PdfS4R2K0 Gm10566-201ENSMUST00000086739 996 ntBASIC11.51□□□□□ -0.57
PdfS4R2K0 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PdfS4R2K0 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PdfS4R2K0 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PdfS4R2K0 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
PdfS4R2K0 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PdfS4R2K0 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
PdfS4R2K0 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
PdfS4R2K0 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PdfS4R2K0 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
PdfS4R2K0 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PdfS4R2K0 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
PdfS4R2K0 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
PdfS4R2K0 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PdfS4R2K0 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
PdfS4R2K0 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
PdfS4R2K0 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms