Protein–RNA interactions for Protein: Q9Z0H8

Clip2, CAP-Gly domain-containing linker protein 2, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip2Q9Z0H8 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clip2Q9Z0H8 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clip2Q9Z0H8 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clip2Q9Z0H8 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Clip2Q9Z0H8 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clip2Q9Z0H8 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clip2Q9Z0H8 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clip2Q9Z0H8 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clip2Q9Z0H8 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Clip2Q9Z0H8 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clip2Q9Z0H8 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clip2Q9Z0H8 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clip2Q9Z0H8 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.4■□□□□ 0.38
Clip2Q9Z0H8 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Clip2Q9Z0H8 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Clip2Q9Z0H8 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.4■□□□□ 0.38
Clip2Q9Z0H8 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.4■□□□□ 0.38
Clip2Q9Z0H8 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.4■□□□□ 0.38
Clip2Q9Z0H8 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.4■□□□□ 0.38
Clip2Q9Z0H8 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clip2Q9Z0H8 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clip2Q9Z0H8 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Clip2Q9Z0H8 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clip2Q9Z0H8 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Clip2Q9Z0H8 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Clip2Q9Z0H8 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Clip2Q9Z0H8 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clip2Q9Z0H8 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.4■□□□□ 0.38
Clip2Q9Z0H8 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clip2Q9Z0H8 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.4■□□□□ 0.38
Clip2Q9Z0H8 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clip2Q9Z0H8 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clip2Q9Z0H8 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Clip2Q9Z0H8 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clip2Q9Z0H8 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Clip2Q9Z0H8 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clip2Q9Z0H8 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.39■□□□□ 0.38
Clip2Q9Z0H8 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Clip2Q9Z0H8 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Clip2Q9Z0H8 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Clip2Q9Z0H8 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Clip2Q9Z0H8 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Clip2Q9Z0H8 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Clip2Q9Z0H8 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Clip2Q9Z0H8 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clip2Q9Z0H8 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Clip2Q9Z0H8 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Clip2Q9Z0H8 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Clip2Q9Z0H8 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.39■□□□□ 0.37
Clip2Q9Z0H8 Mir6990-201ENSMUST00000183724 91 ntBASIC17.39■□□□□ 0.37
Clip2Q9Z0H8 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Clip2Q9Z0H8 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clip2Q9Z0H8 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Clip2Q9Z0H8 Gm8396-201ENSMUST00000057361 823 ntBASIC17.39■□□□□ 0.37
Clip2Q9Z0H8 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clip2Q9Z0H8 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clip2Q9Z0H8 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clip2Q9Z0H8 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.39■□□□□ 0.37
Clip2Q9Z0H8 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.39■□□□□ 0.37
Clip2Q9Z0H8 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clip2Q9Z0H8 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clip2Q9Z0H8 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Clip2Q9Z0H8 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clip2Q9Z0H8 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Clip2Q9Z0H8 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.39■□□□□ 0.37
Clip2Q9Z0H8 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clip2Q9Z0H8 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Clip2Q9Z0H8 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clip2Q9Z0H8 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.38■□□□□ 0.37
Clip2Q9Z0H8 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clip2Q9Z0H8 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clip2Q9Z0H8 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clip2Q9Z0H8 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clip2Q9Z0H8 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Clip2Q9Z0H8 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
Clip2Q9Z0H8 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clip2Q9Z0H8 BC037039-201ENSMUST00000192003 2205 ntBASIC17.38■□□□□ 0.37
Clip2Q9Z0H8 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Clip2Q9Z0H8 Gm6973-201ENSMUST00000117080 721 ntBASIC17.38■□□□□ 0.37
Clip2Q9Z0H8 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.38■□□□□ 0.37
Clip2Q9Z0H8 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Clip2Q9Z0H8 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.38■□□□□ 0.37
Clip2Q9Z0H8 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Clip2Q9Z0H8 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.38■□□□□ 0.37
Clip2Q9Z0H8 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Clip2Q9Z0H8 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.38■□□□□ 0.37
Clip2Q9Z0H8 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Clip2Q9Z0H8 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.38■□□□□ 0.37
Clip2Q9Z0H8 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.38■□□□□ 0.37
Clip2Q9Z0H8 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Clip2Q9Z0H8 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Clip2Q9Z0H8 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clip2Q9Z0H8 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Clip2Q9Z0H8 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Clip2Q9Z0H8 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clip2Q9Z0H8 Asic1-205ENSMUST00000228185 1818 ntBASIC17.37■□□□□ 0.37
Clip2Q9Z0H8 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Clip2Q9Z0H8 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clip2Q9Z0H8 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clip2Q9Z0H8 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms