Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx9Q9WUH2 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.22□□□□□ -0.13
Lhx9Q9WUH2 Gm13616-201ENSMUST00000120600 222 ntBASIC14.22□□□□□ -0.13
Lhx9Q9WUH2 Rpph1-201ENSMUST00000175096 319 ntBASIC14.22□□□□□ -0.13
Lhx9Q9WUH2 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Lhx9Q9WUH2 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx9Q9WUH2 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.22□□□□□ -0.13
Lhx9Q9WUH2 Mir6956-201ENSMUST00000183598 62 ntBASIC14.22□□□□□ -0.13
Lhx9Q9WUH2 Gm20553-201ENSMUST00000204205 844 ntBASIC14.22□□□□□ -0.13
Lhx9Q9WUH2 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Lhx9Q9WUH2 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.22□□□□□ -0.13
Lhx9Q9WUH2 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.22□□□□□ -0.13
Lhx9Q9WUH2 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx9Q9WUH2 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.22□□□□□ -0.13
Lhx9Q9WUH2 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Lhx9Q9WUH2 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx9Q9WUH2 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx9Q9WUH2 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx9Q9WUH2 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.22□□□□□ -0.13
Lhx9Q9WUH2 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx9Q9WUH2 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx9Q9WUH2 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Lhx9Q9WUH2 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx9Q9WUH2 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx9Q9WUH2 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.22□□□□□ -0.13
Lhx9Q9WUH2 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx9Q9WUH2 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx9Q9WUH2 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx9Q9WUH2 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
Lhx9Q9WUH2 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.21□□□□□ -0.13
Lhx9Q9WUH2 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx9Q9WUH2 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx9Q9WUH2 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx9Q9WUH2 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx9Q9WUH2 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx9Q9WUH2 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Lhx9Q9WUH2 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.21□□□□□ -0.13
Lhx9Q9WUH2 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.21□□□□□ -0.13
Lhx9Q9WUH2 Gm9385-201ENSMUST00000117563 472 ntBASIC14.21□□□□□ -0.13
Lhx9Q9WUH2 Gm16198-201ENSMUST00000118766 670 ntBASIC14.21□□□□□ -0.13
Lhx9Q9WUH2 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx9Q9WUH2 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.21□□□□□ -0.13
Lhx9Q9WUH2 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx9Q9WUH2 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Lhx9Q9WUH2 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx9Q9WUH2 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.21□□□□□ -0.13
Lhx9Q9WUH2 Mir6990-201ENSMUST00000183724 91 ntBASIC14.21□□□□□ -0.13
Lhx9Q9WUH2 Gm2272-201ENSMUST00000194903 582 ntBASIC14.21□□□□□ -0.13
Lhx9Q9WUH2 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx9Q9WUH2 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.21□□□□□ -0.13
Lhx9Q9WUH2 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.21□□□□□ -0.13
Lhx9Q9WUH2 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.21□□□□□ -0.13
Lhx9Q9WUH2 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx9Q9WUH2 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx9Q9WUH2 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Lhx9Q9WUH2 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx9Q9WUH2 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx9Q9WUH2 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Lhx9Q9WUH2 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Lhx9Q9WUH2 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Lhx9Q9WUH2 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Lhx9Q9WUH2 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Lhx9Q9WUH2 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Lhx9Q9WUH2 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Lhx9Q9WUH2 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Lhx9Q9WUH2 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Lhx9Q9WUH2 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.2□□□□□ -0.14
Lhx9Q9WUH2 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx9Q9WUH2 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx9Q9WUH2 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx9Q9WUH2 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.2□□□□□ -0.14
Lhx9Q9WUH2 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx9Q9WUH2 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Lhx9Q9WUH2 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx9Q9WUH2 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx9Q9WUH2 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx9Q9WUH2 Gm18889-201ENSMUST00000174284 929 ntBASIC14.2□□□□□ -0.14
Lhx9Q9WUH2 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.2□□□□□ -0.14
Lhx9Q9WUH2 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Lhx9Q9WUH2 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Lhx9Q9WUH2 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.2□□□□□ -0.14
Lhx9Q9WUH2 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx9Q9WUH2 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx9Q9WUH2 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx9Q9WUH2 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx9Q9WUH2 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx9Q9WUH2 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx9Q9WUH2 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx9Q9WUH2 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Lhx9Q9WUH2 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx9Q9WUH2 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx9Q9WUH2 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx9Q9WUH2 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx9Q9WUH2 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx9Q9WUH2 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx9Q9WUH2 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx9Q9WUH2 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx9Q9WUH2 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx9Q9WUH2 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx9Q9WUH2 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms