Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CcsQ9WU84 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CcsQ9WU84 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CcsQ9WU84 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.68□□□□□ -0.54
CcsQ9WU84 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
CcsQ9WU84 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
CcsQ9WU84 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CcsQ9WU84 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.68□□□□□ -0.54
CcsQ9WU84 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CcsQ9WU84 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CcsQ9WU84 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
CcsQ9WU84 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CcsQ9WU84 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CcsQ9WU84 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
CcsQ9WU84 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CcsQ9WU84 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CcsQ9WU84 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CcsQ9WU84 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CcsQ9WU84 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
CcsQ9WU84 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
CcsQ9WU84 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC11.67□□□□□ -0.54
CcsQ9WU84 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC11.67□□□□□ -0.54
CcsQ9WU84 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CcsQ9WU84 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CcsQ9WU84 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CcsQ9WU84 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CcsQ9WU84 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CcsQ9WU84 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC11.67□□□□□ -0.54
CcsQ9WU84 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CcsQ9WU84 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CcsQ9WU84 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
CcsQ9WU84 Gm43205-201ENSMUST00000198622 1968 ntBASIC11.67□□□□□ -0.54
CcsQ9WU84 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CcsQ9WU84 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
CcsQ9WU84 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CcsQ9WU84 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CcsQ9WU84 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CcsQ9WU84 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CcsQ9WU84 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
CcsQ9WU84 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.66□□□□□ -0.54
CcsQ9WU84 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
CcsQ9WU84 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
CcsQ9WU84 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CcsQ9WU84 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CcsQ9WU84 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CcsQ9WU84 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CcsQ9WU84 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
CcsQ9WU84 Ank2-226ENSMUST00000189368 339 ntBASIC11.66□□□□□ -0.54
CcsQ9WU84 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC11.66□□□□□ -0.54
CcsQ9WU84 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC11.66□□□□□ -0.54
CcsQ9WU84 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CcsQ9WU84 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CcsQ9WU84 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CcsQ9WU84 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CcsQ9WU84 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC11.66□□□□□ -0.54
CcsQ9WU84 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CcsQ9WU84 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.66□□□□□ -0.54
CcsQ9WU84 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CcsQ9WU84 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CcsQ9WU84 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
CcsQ9WU84 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CcsQ9WU84 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
CcsQ9WU84 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
CcsQ9WU84 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CcsQ9WU84 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.66□□□□□ -0.54
CcsQ9WU84 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CcsQ9WU84 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
CcsQ9WU84 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CcsQ9WU84 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC11.66□□□□□ -0.54
CcsQ9WU84 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
CcsQ9WU84 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CcsQ9WU84 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CcsQ9WU84 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CcsQ9WU84 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CcsQ9WU84 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
CcsQ9WU84 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CcsQ9WU84 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
CcsQ9WU84 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
CcsQ9WU84 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CcsQ9WU84 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CcsQ9WU84 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
CcsQ9WU84 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
CcsQ9WU84 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CcsQ9WU84 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CcsQ9WU84 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC11.65□□□□□ -0.54
CcsQ9WU84 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CcsQ9WU84 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CcsQ9WU84 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CcsQ9WU84 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CcsQ9WU84 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CcsQ9WU84 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC11.65□□□□□ -0.54
CcsQ9WU84 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CcsQ9WU84 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC11.65□□□□□ -0.54
CcsQ9WU84 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC11.65□□□□□ -0.54
CcsQ9WU84 Gm29707-201ENSMUST00000196325 491 ntBASIC11.65□□□□□ -0.54
CcsQ9WU84 Gm44450-201ENSMUST00000199528 114 ntBASIC11.65□□□□□ -0.54
CcsQ9WU84 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CcsQ9WU84 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
CcsQ9WU84 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CcsQ9WU84 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms