Protein–RNA interactions for Protein: Q9WU28

Pfdn5, Prefoldin subunit 5, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn5Q9WU28 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn5Q9WU28 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn5Q9WU28 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn5Q9WU28 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn5Q9WU28 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn5Q9WU28 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn5Q9WU28 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.33□□□□□ -0.44
Pfdn5Q9WU28 BC037039-201ENSMUST00000192003 2205 ntBASIC12.33□□□□□ -0.44
Pfdn5Q9WU28 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn5Q9WU28 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 Gm10052-201ENSMUST00000168019 960 ntBASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 Gm7729-201ENSMUST00000050143 801 ntBASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn5Q9WU28 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 Gm6257-201ENSMUST00000163864 910 ntBASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 Gm10566-201ENSMUST00000086739 996 ntBASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Pfdn5Q9WU28 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.3□□□□□ -0.44
Pfdn5Q9WU28 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.3□□□□□ -0.44
Pfdn5Q9WU28 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn5Q9WU28 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Pfdn5Q9WU28 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn5Q9WU28 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn5Q9WU28 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn5Q9WU28 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms