Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Col13a1Q9R1N9 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col13a1Q9R1N9 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col13a1Q9R1N9 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Col13a1Q9R1N9 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col13a1Q9R1N9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col13a1Q9R1N9 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col13a1Q9R1N9 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col13a1Q9R1N9 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col13a1Q9R1N9 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col13a1Q9R1N9 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.76□□□□□ -0.37
Col13a1Q9R1N9 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col13a1Q9R1N9 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col13a1Q9R1N9 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.76□□□□□ -0.37
Col13a1Q9R1N9 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.76□□□□□ -0.37
Col13a1Q9R1N9 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.76□□□□□ -0.37
Col13a1Q9R1N9 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.76□□□□□ -0.37
Col13a1Q9R1N9 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.76□□□□□ -0.37
Col13a1Q9R1N9 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col13a1Q9R1N9 Gm27306-201ENSMUST00000183970 107 ntBASIC12.76□□□□□ -0.37
Col13a1Q9R1N9 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col13a1Q9R1N9 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.76□□□□□ -0.37
Col13a1Q9R1N9 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col13a1Q9R1N9 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col13a1Q9R1N9 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col13a1Q9R1N9 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col13a1Q9R1N9 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Col13a1Q9R1N9 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col13a1Q9R1N9 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col13a1Q9R1N9 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col13a1Q9R1N9 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Col13a1Q9R1N9 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col13a1Q9R1N9 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col13a1Q9R1N9 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col13a1Q9R1N9 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col13a1Q9R1N9 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col13a1Q9R1N9 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col13a1Q9R1N9 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col13a1Q9R1N9 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col13a1Q9R1N9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col13a1Q9R1N9 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col13a1Q9R1N9 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col13a1Q9R1N9 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col13a1Q9R1N9 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col13a1Q9R1N9 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col13a1Q9R1N9 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col13a1Q9R1N9 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col13a1Q9R1N9 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col13a1Q9R1N9 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col13a1Q9R1N9 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col13a1Q9R1N9 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.75□□□□□ -0.37
Col13a1Q9R1N9 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.75□□□□□ -0.37
Col13a1Q9R1N9 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.75□□□□□ -0.37
Col13a1Q9R1N9 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col13a1Q9R1N9 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col13a1Q9R1N9 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.75□□□□□ -0.37
Col13a1Q9R1N9 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.75□□□□□ -0.37
Col13a1Q9R1N9 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col13a1Q9R1N9 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col13a1Q9R1N9 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.75□□□□□ -0.37
Col13a1Q9R1N9 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col13a1Q9R1N9 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col13a1Q9R1N9 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col13a1Q9R1N9 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col13a1Q9R1N9 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col13a1Q9R1N9 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col13a1Q9R1N9 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col13a1Q9R1N9 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col13a1Q9R1N9 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col13a1Q9R1N9 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Col13a1Q9R1N9 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col13a1Q9R1N9 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Col13a1Q9R1N9 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col13a1Q9R1N9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col13a1Q9R1N9 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col13a1Q9R1N9 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.74□□□□□ -0.37
Col13a1Q9R1N9 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col13a1Q9R1N9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col13a1Q9R1N9 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.74□□□□□ -0.37
Col13a1Q9R1N9 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col13a1Q9R1N9 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.74□□□□□ -0.37
Col13a1Q9R1N9 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col13a1Q9R1N9 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col13a1Q9R1N9 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col13a1Q9R1N9 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col13a1Q9R1N9 Gm9794-201ENSMUST00000202370 423 ntBASIC12.74□□□□□ -0.37
Col13a1Q9R1N9 Gm19164-201ENSMUST00000210667 640 ntBASIC12.74□□□□□ -0.37
Col13a1Q9R1N9 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.74□□□□□ -0.37
Col13a1Q9R1N9 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Col13a1Q9R1N9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col13a1Q9R1N9 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Col13a1Q9R1N9 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col13a1Q9R1N9 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Col13a1Q9R1N9 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col13a1Q9R1N9 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col13a1Q9R1N9 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.74□□□□□ -0.37
Col13a1Q9R1N9 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Col13a1Q9R1N9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col13a1Q9R1N9 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms