Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clcf1Q9QZM3 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clcf1Q9QZM3 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcf1Q9QZM3 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcf1Q9QZM3 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcf1Q9QZM3 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcf1Q9QZM3 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.62□□□□□ -0.23
Clcf1Q9QZM3 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clcf1Q9QZM3 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.62□□□□□ -0.23
Clcf1Q9QZM3 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.62□□□□□ -0.23
Clcf1Q9QZM3 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.62□□□□□ -0.23
Clcf1Q9QZM3 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.62□□□□□ -0.23
Clcf1Q9QZM3 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Clcf1Q9QZM3 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clcf1Q9QZM3 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Clcf1Q9QZM3 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.62□□□□□ -0.23
Clcf1Q9QZM3 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcf1Q9QZM3 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clcf1Q9QZM3 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Clcf1Q9QZM3 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcf1Q9QZM3 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcf1Q9QZM3 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clcf1Q9QZM3 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcf1Q9QZM3 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcf1Q9QZM3 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Clcf1Q9QZM3 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcf1Q9QZM3 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clcf1Q9QZM3 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clcf1Q9QZM3 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcf1Q9QZM3 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
Clcf1Q9QZM3 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcf1Q9QZM3 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcf1Q9QZM3 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcf1Q9QZM3 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcf1Q9QZM3 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcf1Q9QZM3 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clcf1Q9QZM3 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clcf1Q9QZM3 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Clcf1Q9QZM3 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcf1Q9QZM3 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clcf1Q9QZM3 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Clcf1Q9QZM3 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Clcf1Q9QZM3 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcf1Q9QZM3 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcf1Q9QZM3 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Clcf1Q9QZM3 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Clcf1Q9QZM3 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcf1Q9QZM3 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcf1Q9QZM3 Gm13597-201ENSMUST00000121239 375 ntBASIC13.61□□□□□ -0.23
Clcf1Q9QZM3 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.61□□□□□ -0.23
Clcf1Q9QZM3 Gm25911-201ENSMUST00000157621 56 ntBASIC13.61□□□□□ -0.23
Clcf1Q9QZM3 Gm27702-201ENSMUST00000184512 56 ntBASIC13.61□□□□□ -0.23
Clcf1Q9QZM3 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.61□□□□□ -0.23
Clcf1Q9QZM3 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Clcf1Q9QZM3 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.61□□□□□ -0.23
Clcf1Q9QZM3 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcf1Q9QZM3 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcf1Q9QZM3 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcf1Q9QZM3 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcf1Q9QZM3 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Clcf1Q9QZM3 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcf1Q9QZM3 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcf1Q9QZM3 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.61□□□□□ -0.23
Clcf1Q9QZM3 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcf1Q9QZM3 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcf1Q9QZM3 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcf1Q9QZM3 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Clcf1Q9QZM3 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcf1Q9QZM3 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Clcf1Q9QZM3 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcf1Q9QZM3 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.6□□□□□ -0.23
Clcf1Q9QZM3 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcf1Q9QZM3 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Clcf1Q9QZM3 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Clcf1Q9QZM3 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.6□□□□□ -0.23
Clcf1Q9QZM3 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.6□□□□□ -0.23
Clcf1Q9QZM3 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.6□□□□□ -0.23
Clcf1Q9QZM3 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Clcf1Q9QZM3 Gm8318-201ENSMUST00000182954 872 ntBASIC13.6□□□□□ -0.23
Clcf1Q9QZM3 Gm2756-201ENSMUST00000195851 400 ntBASIC13.6□□□□□ -0.23
Clcf1Q9QZM3 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.6□□□□□ -0.23
Clcf1Q9QZM3 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.6□□□□□ -0.23
Clcf1Q9QZM3 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcf1Q9QZM3 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcf1Q9QZM3 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
Clcf1Q9QZM3 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.6□□□□□ -0.23
Clcf1Q9QZM3 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcf1Q9QZM3 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcf1Q9QZM3 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Clcf1Q9QZM3 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Clcf1Q9QZM3 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcf1Q9QZM3 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Clcf1Q9QZM3 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clcf1Q9QZM3 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clcf1Q9QZM3 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clcf1Q9QZM3 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clcf1Q9QZM3 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clcf1Q9QZM3 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clcf1Q9QZM3 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clcf1Q9QZM3 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms