Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl28Q9JIL2 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl28Q9JIL2 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl28Q9JIL2 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Ccl28Q9JIL2 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Ccl28Q9JIL2 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl28Q9JIL2 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl28Q9JIL2 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl28Q9JIL2 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl28Q9JIL2 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.11□□□□□ -0.47
Ccl28Q9JIL2 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.11□□□□□ -0.47
Ccl28Q9JIL2 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl28Q9JIL2 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Ccl28Q9JIL2 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl28Q9JIL2 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Ccl28Q9JIL2 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.11□□□□□ -0.47
Ccl28Q9JIL2 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl28Q9JIL2 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl28Q9JIL2 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl28Q9JIL2 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.11□□□□□ -0.47
Ccl28Q9JIL2 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl28Q9JIL2 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl28Q9JIL2 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ccl28Q9JIL2 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ccl28Q9JIL2 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ccl28Q9JIL2 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl28Q9JIL2 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl28Q9JIL2 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ccl28Q9JIL2 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl28Q9JIL2 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl28Q9JIL2 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl28Q9JIL2 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl28Q9JIL2 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Ccl28Q9JIL2 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Ccl28Q9JIL2 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl28Q9JIL2 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl28Q9JIL2 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ccl28Q9JIL2 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl28Q9JIL2 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl28Q9JIL2 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl28Q9JIL2 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl28Q9JIL2 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl28Q9JIL2 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl28Q9JIL2 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl28Q9JIL2 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl28Q9JIL2 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl28Q9JIL2 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl28Q9JIL2 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ccl28Q9JIL2 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.1□□□□□ -0.47
Ccl28Q9JIL2 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl28Q9JIL2 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.1□□□□□ -0.47
Ccl28Q9JIL2 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.1□□□□□ -0.47
Ccl28Q9JIL2 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ccl28Q9JIL2 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.1□□□□□ -0.47
Ccl28Q9JIL2 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.1□□□□□ -0.47
Ccl28Q9JIL2 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ccl28Q9JIL2 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl28Q9JIL2 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl28Q9JIL2 Gm27646-201ENSMUST00000183989 110 ntBASIC12.1□□□□□ -0.47
Ccl28Q9JIL2 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.1□□□□□ -0.47
Ccl28Q9JIL2 Gm6296-201ENSMUST00000222599 943 ntBASIC12.1□□□□□ -0.47
Ccl28Q9JIL2 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.1□□□□□ -0.47
Ccl28Q9JIL2 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl28Q9JIL2 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ccl28Q9JIL2 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl28Q9JIL2 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.1□□□□□ -0.47
Ccl28Q9JIL2 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl28Q9JIL2 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.1□□□□□ -0.47
Ccl28Q9JIL2 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl28Q9JIL2 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl28Q9JIL2 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl28Q9JIL2 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl28Q9JIL2 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl28Q9JIL2 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl28Q9JIL2 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl28Q9JIL2 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl28Q9JIL2 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl28Q9JIL2 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl28Q9JIL2 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Ccl28Q9JIL2 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl28Q9JIL2 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ccl28Q9JIL2 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl28Q9JIL2 AC154231.1-201ENSMUST00000220564 2175 ntBASIC12.09□□□□□ -0.47
Ccl28Q9JIL2 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl28Q9JIL2 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl28Q9JIL2 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl28Q9JIL2 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.09□□□□□ -0.47
Ccl28Q9JIL2 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl28Q9JIL2 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl28Q9JIL2 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Ccl28Q9JIL2 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl28Q9JIL2 Celf4-206ENSMUST00000224553 1729 ntBASIC12.09□□□□□ -0.47
Ccl28Q9JIL2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl28Q9JIL2 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl28Q9JIL2 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl28Q9JIL2 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl28Q9JIL2 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Ccl28Q9JIL2 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Ccl28Q9JIL2 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl28Q9JIL2 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms