Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm21873-201ENSMUST00000186728 696 ntBASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Gm21794-201ENSMUST00000187056 696 ntBASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Gm21880-201ENSMUST00000187275 696 ntBASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Gm21826-201ENSMUST00000187451 696 ntBASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Gm21198-201ENSMUST00000188393 696 ntBASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Gm21749-201ENSMUST00000189343 696 ntBASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Gm21901-201ENSMUST00000189568 696 ntBASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Gm29424-201ENSMUST00000189716 696 ntBASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Gm28599-201ENSMUST00000189838 694 ntBASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Gm21867-201ENSMUST00000189917 696 ntBASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Gm29269-201ENSMUST00000190087 696 ntBASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Gm21722-201ENSMUST00000190153 696 ntBASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Gm28423-201ENSMUST00000190701 696 ntBASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Gm21899-201ENSMUST00000190745 696 ntBASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Gm21910-201ENSMUST00000191163 696 ntBASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Gm21849-201ENSMUST00000191571 696 ntBASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Gm28678-201ENSMUST00000191593 696 ntBASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Gm20910-201ENSMUST00000193268 696 ntBASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Gm21871-201ENSMUST00000194621 696 ntBASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Gm5035-201ENSMUST00000215581 927 ntBASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.27■□□□□ 0.04
Nkx2-4Q9EQM3 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-4Q9EQM3 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-4Q9EQM3 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-4Q9EQM3 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Nkx2-4Q9EQM3 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-4Q9EQM3 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Nkx2-4Q9EQM3 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-4Q9EQM3 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-4Q9EQM3 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Nkx2-4Q9EQM3 Gm9002-201ENSMUST00000178437 499 ntBASIC15.27■□□□□ 0.04
Nkx2-4Q9EQM3 Gm21854-201ENSMUST00000179901 471 ntBASIC15.27■□□□□ 0.04
Nkx2-4Q9EQM3 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.27■□□□□ 0.04
Nkx2-4Q9EQM3 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-4Q9EQM3 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Nkx2-4Q9EQM3 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-4Q9EQM3 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.27■□□□□ 0.03
Nkx2-4Q9EQM3 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx2-4Q9EQM3 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Nkx2-4Q9EQM3 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx2-4Q9EQM3 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Nkx2-4Q9EQM3 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx2-4Q9EQM3 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx2-4Q9EQM3 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx2-4Q9EQM3 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-4Q9EQM3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-4Q9EQM3 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Nkx2-4Q9EQM3 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-4Q9EQM3 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.26■□□□□ 0.03
Nkx2-4Q9EQM3 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-4Q9EQM3 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Nkx2-4Q9EQM3 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-4Q9EQM3 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-4Q9EQM3 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Nkx2-4Q9EQM3 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-4Q9EQM3 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.26■□□□□ 0.03
Nkx2-4Q9EQM3 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-4Q9EQM3 AC165157.4-201ENSMUST00000220587 139 ntBASIC15.26■□□□□ 0.03
Nkx2-4Q9EQM3 Gm9229-201ENSMUST00000222777 126 ntBASIC15.26■□□□□ 0.03
Nkx2-4Q9EQM3 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-4Q9EQM3 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-4Q9EQM3 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-4Q9EQM3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-4Q9EQM3 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-4Q9EQM3 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-4Q9EQM3 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-4Q9EQM3 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-4Q9EQM3 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-4Q9EQM3 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-4Q9EQM3 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-4Q9EQM3 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-4Q9EQM3 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-4Q9EQM3 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-4Q9EQM3 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-4Q9EQM3 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
Nkx2-4Q9EQM3 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Nkx2-4Q9EQM3 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-4Q9EQM3 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-4Q9EQM3 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-4Q9EQM3 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Nkx2-4Q9EQM3 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-4Q9EQM3 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.25■□□□□ 0.03
Nkx2-4Q9EQM3 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-4Q9EQM3 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-4Q9EQM3 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-4Q9EQM3 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-4Q9EQM3 Gm12742-201ENSMUST00000117326 410 ntBASIC15.25■□□□□ 0.03
Nkx2-4Q9EQM3 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.25■□□□□ 0.03
Nkx2-4Q9EQM3 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms