Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps35Q9EQH3 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.01□□□□□ -0.01
Vps35Q9EQH3 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps35Q9EQH3 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Vps35Q9EQH3 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vps35Q9EQH3 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps35Q9EQH3 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps35Q9EQH3 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.01□□□□□ -0.01
Vps35Q9EQH3 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.01□□□□□ -0.01
Vps35Q9EQH3 Gm9727-201ENSMUST00000161387 555 ntBASIC15.01□□□□□ -0.01
Vps35Q9EQH3 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vps35Q9EQH3 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.01□□□□□ -0.01
Vps35Q9EQH3 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vps35Q9EQH3 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps35Q9EQH3 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vps35Q9EQH3 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps35Q9EQH3 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.01□□□□□ -0.01
Vps35Q9EQH3 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps35Q9EQH3 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps35Q9EQH3 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps35Q9EQH3 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps35Q9EQH3 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps35Q9EQH3 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps35Q9EQH3 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps35Q9EQH3 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps35Q9EQH3 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
Vps35Q9EQH3 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15□□□□□ -0.01
Vps35Q9EQH3 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps35Q9EQH3 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15□□□□□ -0.01
Vps35Q9EQH3 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15□□□□□ -0.01
Vps35Q9EQH3 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Vps35Q9EQH3 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Vps35Q9EQH3 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps35Q9EQH3 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15□□□□□ -0.01
Vps35Q9EQH3 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15□□□□□ -0.01
Vps35Q9EQH3 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15□□□□□ -0.01
Vps35Q9EQH3 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15□□□□□ -0.01
Vps35Q9EQH3 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Vps35Q9EQH3 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Vps35Q9EQH3 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15□□□□□ -0.01
Vps35Q9EQH3 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Vps35Q9EQH3 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15□□□□□ -0.01
Vps35Q9EQH3 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps35Q9EQH3 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps35Q9EQH3 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps35Q9EQH3 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps35Q9EQH3 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps35Q9EQH3 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps35Q9EQH3 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Vps35Q9EQH3 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps35Q9EQH3 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Vps35Q9EQH3 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps35Q9EQH3 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps35Q9EQH3 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps35Q9EQH3 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.99□□□□□ -0.01
Vps35Q9EQH3 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps35Q9EQH3 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps35Q9EQH3 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Vps35Q9EQH3 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps35Q9EQH3 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps35Q9EQH3 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps35Q9EQH3 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps35Q9EQH3 Gm27525-201ENSMUST00000184465 107 ntBASIC14.99□□□□□ -0.01
Vps35Q9EQH3 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vps35Q9EQH3 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vps35Q9EQH3 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.99□□□□□ -0.01
Vps35Q9EQH3 Gm18246-201ENSMUST00000221023 728 ntBASIC14.99□□□□□ -0.01
Vps35Q9EQH3 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.99□□□□□ -0.01
Vps35Q9EQH3 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps35Q9EQH3 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Vps35Q9EQH3 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Vps35Q9EQH3 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps35Q9EQH3 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps35Q9EQH3 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Vps35Q9EQH3 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps35Q9EQH3 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.98□□□□□ -0.01
Vps35Q9EQH3 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps35Q9EQH3 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vps35Q9EQH3 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vps35Q9EQH3 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps35Q9EQH3 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Vps35Q9EQH3 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Vps35Q9EQH3 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Vps35Q9EQH3 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
Vps35Q9EQH3 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps35Q9EQH3 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Vps35Q9EQH3 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Vps35Q9EQH3 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps35Q9EQH3 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps35Q9EQH3 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
Vps35Q9EQH3 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.98□□□□□ -0.01
Vps35Q9EQH3 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps35Q9EQH3 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
Vps35Q9EQH3 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.98□□□□□ -0.01
Vps35Q9EQH3 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps35Q9EQH3 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps35Q9EQH3 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Vps35Q9EQH3 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps35Q9EQH3 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vps35Q9EQH3 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms