Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
U2af1Q9D883 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
U2af1Q9D883 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
U2af1Q9D883 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
U2af1Q9D883 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
U2af1Q9D883 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
U2af1Q9D883 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
U2af1Q9D883 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
U2af1Q9D883 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
U2af1Q9D883 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
U2af1Q9D883 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
U2af1Q9D883 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC19.67■□□□□ 0.74
U2af1Q9D883 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
U2af1Q9D883 Gm30437-201ENSMUST00000206086 1201 ntBASIC19.67■□□□□ 0.74
U2af1Q9D883 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
U2af1Q9D883 Mxra8os-201ENSMUST00000097740 687 ntBASIC19.67■□□□□ 0.74
U2af1Q9D883 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
U2af1Q9D883 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
U2af1Q9D883 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC19.67■□□□□ 0.74
U2af1Q9D883 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
U2af1Q9D883 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
U2af1Q9D883 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
U2af1Q9D883 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
U2af1Q9D883 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
U2af1Q9D883 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
U2af1Q9D883 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
U2af1Q9D883 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
U2af1Q9D883 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
U2af1Q9D883 Rprl2-201ENSMUST00000157150 290 ntBASIC19.66■□□□□ 0.74
U2af1Q9D883 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC19.66■□□□□ 0.74
U2af1Q9D883 Gm44335-201ENSMUST00000196879 141 ntBASIC19.66■□□□□ 0.74
U2af1Q9D883 Gm44297-201ENSMUST00000198304 141 ntBASIC19.66■□□□□ 0.74
U2af1Q9D883 Gm44346-201ENSMUST00000198851 141 ntBASIC19.66■□□□□ 0.74
U2af1Q9D883 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC19.66■□□□□ 0.74
U2af1Q9D883 AC131187.1-201ENSMUST00000224567 809 ntBASIC19.66■□□□□ 0.74
U2af1Q9D883 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
U2af1Q9D883 Gm10313-201ENSMUST00000095320 1002 ntBASIC19.66■□□□□ 0.74
U2af1Q9D883 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
U2af1Q9D883 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
U2af1Q9D883 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
U2af1Q9D883 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
U2af1Q9D883 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
U2af1Q9D883 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
U2af1Q9D883 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
U2af1Q9D883 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
U2af1Q9D883 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
U2af1Q9D883 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
U2af1Q9D883 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
U2af1Q9D883 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
U2af1Q9D883 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
U2af1Q9D883 Gm8096-201ENSMUST00000209921 1591 ntBASIC19.66■□□□□ 0.74
U2af1Q9D883 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
U2af1Q9D883 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
U2af1Q9D883 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
U2af1Q9D883 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
U2af1Q9D883 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
U2af1Q9D883 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
U2af1Q9D883 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
U2af1Q9D883 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
U2af1Q9D883 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
U2af1Q9D883 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC19.65■□□□□ 0.74
U2af1Q9D883 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC19.65■□□□□ 0.74
U2af1Q9D883 Gm15483-201ENSMUST00000120338 456 ntBASIC19.65■□□□□ 0.74
U2af1Q9D883 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC19.65■□□□□ 0.74
U2af1Q9D883 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
U2af1Q9D883 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC19.65■□□□□ 0.74
U2af1Q9D883 Gm18889-201ENSMUST00000174284 929 ntBASIC19.65■□□□□ 0.74
U2af1Q9D883 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
U2af1Q9D883 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC19.65■□□□□ 0.74
U2af1Q9D883 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
U2af1Q9D883 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
U2af1Q9D883 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC19.65■□□□□ 0.74
U2af1Q9D883 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
U2af1Q9D883 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
U2af1Q9D883 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
U2af1Q9D883 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
U2af1Q9D883 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
U2af1Q9D883 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
U2af1Q9D883 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
U2af1Q9D883 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
U2af1Q9D883 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
U2af1Q9D883 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
U2af1Q9D883 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
U2af1Q9D883 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
U2af1Q9D883 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
U2af1Q9D883 Gm6973-201ENSMUST00000117080 721 ntBASIC19.64■□□□□ 0.73
U2af1Q9D883 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC19.64■□□□□ 0.73
U2af1Q9D883 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
U2af1Q9D883 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
U2af1Q9D883 Gm18057-201ENSMUST00000208220 503 ntBASIC19.64■□□□□ 0.73
U2af1Q9D883 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
U2af1Q9D883 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
U2af1Q9D883 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
U2af1Q9D883 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
U2af1Q9D883 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
U2af1Q9D883 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
U2af1Q9D883 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
U2af1Q9D883 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
U2af1Q9D883 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
U2af1Q9D883 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms