Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ndc80Q9D0F1 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ndc80Q9D0F1 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Ndc80Q9D0F1 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ndc80Q9D0F1 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Ndc80Q9D0F1 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ndc80Q9D0F1 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ndc80Q9D0F1 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ndc80Q9D0F1 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ndc80Q9D0F1 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ndc80Q9D0F1 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ndc80Q9D0F1 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndc80Q9D0F1 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.24■□□□□ 0.03
Ndc80Q9D0F1 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndc80Q9D0F1 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ndc80Q9D0F1 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndc80Q9D0F1 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndc80Q9D0F1 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndc80Q9D0F1 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ndc80Q9D0F1 Mir5131-201ENSMUST00000175426 93 ntBASIC15.24■□□□□ 0.03
Ndc80Q9D0F1 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndc80Q9D0F1 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.24■□□□□ 0.03
Ndc80Q9D0F1 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ndc80Q9D0F1 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ndc80Q9D0F1 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ndc80Q9D0F1 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ndc80Q9D0F1 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ndc80Q9D0F1 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndc80Q9D0F1 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.23■□□□□ 0.03
Ndc80Q9D0F1 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndc80Q9D0F1 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndc80Q9D0F1 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndc80Q9D0F1 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndc80Q9D0F1 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndc80Q9D0F1 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndc80Q9D0F1 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
Ndc80Q9D0F1 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndc80Q9D0F1 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndc80Q9D0F1 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ndc80Q9D0F1 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndc80Q9D0F1 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndc80Q9D0F1 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndc80Q9D0F1 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ndc80Q9D0F1 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndc80Q9D0F1 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.23■□□□□ 0.03
Ndc80Q9D0F1 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.23■□□□□ 0.03
Ndc80Q9D0F1 Gm7787-201ENSMUST00000216858 688 ntBASIC15.23■□□□□ 0.03
Ndc80Q9D0F1 Mzt1-203ENSMUST00000227948 952 ntBASIC15.23■□□□□ 0.03
Ndc80Q9D0F1 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndc80Q9D0F1 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndc80Q9D0F1 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndc80Q9D0F1 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndc80Q9D0F1 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndc80Q9D0F1 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndc80Q9D0F1 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ndc80Q9D0F1 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndc80Q9D0F1 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndc80Q9D0F1 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndc80Q9D0F1 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ndc80Q9D0F1 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndc80Q9D0F1 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ndc80Q9D0F1 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ndc80Q9D0F1 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndc80Q9D0F1 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndc80Q9D0F1 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndc80Q9D0F1 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ndc80Q9D0F1 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndc80Q9D0F1 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ndc80Q9D0F1 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.22■□□□□ 0.03
Ndc80Q9D0F1 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ndc80Q9D0F1 Mir5126-201ENSMUST00000175513 77 ntBASIC15.22■□□□□ 0.03
Ndc80Q9D0F1 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.22■□□□□ 0.03
Ndc80Q9D0F1 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.22■□□□□ 0.03
Ndc80Q9D0F1 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndc80Q9D0F1 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndc80Q9D0F1 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndc80Q9D0F1 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndc80Q9D0F1 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndc80Q9D0F1 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ndc80Q9D0F1 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndc80Q9D0F1 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.22■□□□□ 0.03
Ndc80Q9D0F1 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.22■□□□□ 0.03
Ndc80Q9D0F1 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndc80Q9D0F1 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndc80Q9D0F1 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ndc80Q9D0F1 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ndc80Q9D0F1 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndc80Q9D0F1 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.22■□□□□ 0.03
Ndc80Q9D0F1 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ndc80Q9D0F1 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ndc80Q9D0F1 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ndc80Q9D0F1 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ndc80Q9D0F1 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ndc80Q9D0F1 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.21■□□□□ 0.03
Ndc80Q9D0F1 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ndc80Q9D0F1 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Ndc80Q9D0F1 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ndc80Q9D0F1 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ndc80Q9D0F1 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.21■□□□□ 0.03
Ndc80Q9D0F1 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms