Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ssbp3Q9D032 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssbp3Q9D032 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssbp3Q9D032 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssbp3Q9D032 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ssbp3Q9D032 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.5□□□□□ -0.41
Ssbp3Q9D032 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ssbp3Q9D032 Gm25911-201ENSMUST00000157621 56 ntBASIC12.5□□□□□ -0.41
Ssbp3Q9D032 Gm5177-201ENSMUST00000183092 997 ntBASIC12.5□□□□□ -0.41
Ssbp3Q9D032 Gm27301-201ENSMUST00000184012 127 ntBASIC12.5□□□□□ -0.41
Ssbp3Q9D032 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.5□□□□□ -0.41
Ssbp3Q9D032 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.5□□□□□ -0.41
Ssbp3Q9D032 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.5□□□□□ -0.41
Ssbp3Q9D032 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Ssbp3Q9D032 Thap2-203ENSMUST00000218989 527 ntBASIC12.5□□□□□ -0.41
Ssbp3Q9D032 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssbp3Q9D032 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ssbp3Q9D032 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.5□□□□□ -0.41
Ssbp3Q9D032 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssbp3Q9D032 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssbp3Q9D032 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssbp3Q9D032 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ssbp3Q9D032 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssbp3Q9D032 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ssbp3Q9D032 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssbp3Q9D032 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssbp3Q9D032 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssbp3Q9D032 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ssbp3Q9D032 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ssbp3Q9D032 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssbp3Q9D032 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssbp3Q9D032 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Ssbp3Q9D032 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssbp3Q9D032 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssbp3Q9D032 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssbp3Q9D032 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssbp3Q9D032 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssbp3Q9D032 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ssbp3Q9D032 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssbp3Q9D032 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssbp3Q9D032 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ssbp3Q9D032 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssbp3Q9D032 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssbp3Q9D032 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssbp3Q9D032 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssbp3Q9D032 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssbp3Q9D032 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.49□□□□□ -0.41
Ssbp3Q9D032 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ssbp3Q9D032 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ssbp3Q9D032 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Ssbp3Q9D032 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssbp3Q9D032 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssbp3Q9D032 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssbp3Q9D032 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Ssbp3Q9D032 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssbp3Q9D032 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssbp3Q9D032 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Ssbp3Q9D032 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssbp3Q9D032 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ssbp3Q9D032 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssbp3Q9D032 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssbp3Q9D032 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.48□□□□□ -0.41
Ssbp3Q9D032 Asic1-205ENSMUST00000228185 1818 ntBASIC12.48□□□□□ -0.41
Ssbp3Q9D032 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ssbp3Q9D032 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssbp3Q9D032 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.48□□□□□ -0.41
Ssbp3Q9D032 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssbp3Q9D032 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssbp3Q9D032 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssbp3Q9D032 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.48□□□□□ -0.41
Ssbp3Q9D032 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssbp3Q9D032 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Ssbp3Q9D032 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssbp3Q9D032 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssbp3Q9D032 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssbp3Q9D032 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.48□□□□□ -0.41
Ssbp3Q9D032 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssbp3Q9D032 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssbp3Q9D032 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ssbp3Q9D032 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.48□□□□□ -0.41
Ssbp3Q9D032 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.48□□□□□ -0.41
Ssbp3Q9D032 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssbp3Q9D032 Gm17968-201ENSMUST00000194902 784 ntBASIC12.48□□□□□ -0.41
Ssbp3Q9D032 Gm43575-201ENSMUST00000196420 516 ntBASIC12.48□□□□□ -0.41
Ssbp3Q9D032 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssbp3Q9D032 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.48□□□□□ -0.41
Ssbp3Q9D032 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssbp3Q9D032 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ssbp3Q9D032 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Ssbp3Q9D032 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssbp3Q9D032 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ssbp3Q9D032 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssbp3Q9D032 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssbp3Q9D032 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssbp3Q9D032 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.48□□□□□ -0.41
Ssbp3Q9D032 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssbp3Q9D032 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.48□□□□□ -0.41
Ssbp3Q9D032 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ssbp3Q9D032 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ssbp3Q9D032 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms